FMODB ID: 9R872
Calculation Name: 1XAP-A-Xray547
Preferred Name: Retinoic acid receptor beta
Target Type: SINGLE PROTEIN
Ligand Name: 4-[(1e)-2-(5,5,8,8-tetramethyl-5,6,7,8-tetrahydronaphthalen-2-yl)prop-1-enyl]benzoic acid
Ligand 3-letter code: TTB
Ligand of Interest (LOI):
Structure Source: PDB
PDB ID: 1XAP
Chain ID: A
ChEMBL ID: CHEMBL2008
UniProt ID: P10826
Base Structure: X-ray
Registration Date: 2025-10-05
Reference: Sci Data 11, 1164 (2024).
DOI: https://doi.org/10.1038/s41597-024-03999-2
Apendix: None
Modeling method
| Optimization | MOE:Amber10:EHT |
|---|---|
| Restraint | OptAll |
| Protonation | MOE:Protonate 3D |
| Complement | MOE:Homology Modeling |
| Water | No |
| Procedure | Manual calculation |
| Remarks |
ac.sh, 23 2024 Oct; Missing atoms/residues were imported from a 100% homology model, which was constructed by MOE. |
FMO calculation
| FMO method | FMO2-MP2/6-31G(d) |
|---|---|
| Fragmentation | Auto |
| Number of fragment | 235 |
| LigandResidueName | |
| LigandFragmentNumber | 0 |
| LigandCharge | |
| Software | ABINIT-MP - Open Ver. 1 Rev. 23 (BINDS Ver. 1) / 20230922 |
Total energy (hartree)
| FMO2-HF: Electronic energy | -3018807.435564 |
|---|---|
| FMO2-HF: Nuclear repulsion | 2924204.251547 |
| FMO2-HF: Total energy | -94603.184017 |
| FMO2-MP2: Total energy | -94873.364291 |
3D Structure
Ligand structure
Ligand Interaction
Ligand binding energy
| IFIE [kcal/mol] | PIEDA [kcal/mol] | Charge transfer value [e] | |||
|---|---|---|---|---|---|
| IFIE SUMIFIE SUM at MP2 level. | ESElectro static interaction energy. | EXExchange-repulsion energy. | CT+mixCharge transfer and mixing terms energy. | DI(MP2)Dispersion energy. | q(I=>J)Charge transfer value from I to J fragments. |
| N/A | N/A | N/A | N/A | N/A | N/A |
Interactive mode: IFIE and PIEDA for fragment #1(A:175:ALA)
Summations of interaction energy for
fragment #1(A:175:ALA)
| IFIE [kcal/mol] | PIEDA [kcal/mol] | Charge transfer value [e] | |||
|---|---|---|---|---|---|
| IFIE SUMIFIE SUM at MP2 level. | ESElectro static interaction energy. | EXExchange-repulsion energy. | CT+mixCharge transfer and mixing terms energy. | DI(MP2)Dispersion energy. | q(I=>J)Charge transfer value from I to J fragments. |
| -61.617 | -58.682 | 9.685 | -6.264 | -6.357 | -0.069 |
Interaction energy analysis for fragmet #1(A:175:ALA)
| frag_NumFragment number. | ChainChain species. | Res #Residue number. | RES3-letter code of amino acid residue, ligand and solvent molecule. | FCHARGEFormal charge [e]. | q_MullikenFragment charge evaluated by Mulliken charge [e]. | q_NPAFragment charge evaluated by natural population analysis(NPA) charge [e]. | DISTDistance from Ligand [Å]. | TotalIFIE at MP2 level [kcal/mol]. | ESElectro static interaction energy by PIEDA [kcal/mol]. | EXExchange-repulsion energy by PIEDA [kcal/mol]. | CT+mixCharge transfer and mixing terms energy by PIEDA [kcal/mol]. | DI(MP2)Dispersion energy by PIEDA [kcal/mol]. | q(I=>J)Charge transfer value from I to J fragmens [e]. |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3 | A | 177 | LEU | 0 | 0.023 | 0.023 | 2.949 | 10.984 | 12.774 | 0.042 | -0.757 | -1.075 | -0.001 |
| 4 | A | 178 | ASP | -1 | -0.870 | -0.916 | 1.946 | -93.761 | -93.075 | 9.643 | -5.349 | -4.981 | -0.068 |
| 5 | A | 179 | ASP | -1 | -0.823 | -0.910 | 3.970 | -26.062 | -25.603 | 0.000 | -0.158 | -0.301 | 0.000 |
| 6 | A | 180 | LEU | 0 | 0.007 | 0.005 | 5.918 | 7.120 | 7.120 | 0.000 | 0.000 | 0.000 | 0.000 |
| 7 | A | 181 | THR | 0 | -0.021 | -0.038 | 6.933 | 5.772 | 5.772 | 0.000 | 0.000 | 0.000 | 0.000 |
| 8 | A | 182 | GLU | -1 | -0.931 | -0.956 | 8.070 | -23.905 | -23.905 | 0.000 | 0.000 | 0.000 | 0.000 |
| 9 | A | 183 | LYS | 1 | 0.858 | 0.916 | 8.968 | 34.453 | 34.453 | 0.000 | 0.000 | 0.000 | 0.000 |
| 10 | A | 184 | ILE | 0 | 0.016 | 0.020 | 11.854 | 2.386 | 2.386 | 0.000 | 0.000 | 0.000 | 0.000 |
| 11 | A | 185 | ARG | 1 | 0.831 | 0.915 | 11.338 | 24.701 | 24.701 | 0.000 | 0.000 | 0.000 | 0.000 |
| 12 | A | 186 | LYS | 1 | 0.829 | 0.914 | 13.806 | 19.032 | 19.032 | 0.000 | 0.000 | 0.000 | 0.000 |
| 13 | A | 187 | ALA | 0 | 0.025 | 0.018 | 15.828 | 1.283 | 1.283 | 0.000 | 0.000 | 0.000 | 0.000 |
| 14 | A | 188 | HIS | 0 | 0.009 | 0.020 | 17.603 | 1.091 | 1.091 | 0.000 | 0.000 | 0.000 | 0.000 |
| 15 | A | 189 | GLN | 0 | 0.008 | -0.026 | 16.955 | 0.019 | 0.019 | 0.000 | 0.000 | 0.000 | 0.000 |
| 16 | A | 190 | GLU | -1 | -0.843 | -0.897 | 19.105 | -15.409 | -15.409 | 0.000 | 0.000 | 0.000 | 0.000 |
| 17 | A | 191 | THR | 0 | -0.064 | -0.038 | 21.829 | 0.848 | 0.848 | 0.000 | 0.000 | 0.000 | 0.000 |
| 18 | A | 192 | PHE | 0 | -0.055 | -0.037 | 23.284 | 0.761 | 0.761 | 0.000 | 0.000 | 0.000 | 0.000 |
| 19 | A | 193 | PRO | 0 | 0.009 | 0.016 | 23.878 | -0.344 | -0.344 | 0.000 | 0.000 | 0.000 | 0.000 |
| 20 | A | 194 | SER | 0 | -0.015 | -0.061 | 23.832 | 0.152 | 0.152 | 0.000 | 0.000 | 0.000 | 0.000 |
| 21 | A | 195 | LEU | 0 | -0.017 | -0.024 | 25.817 | 0.379 | 0.379 | 0.000 | 0.000 | 0.000 | 0.000 |
| 22 | A | 196 | CYS | -1 | -0.833 | -0.823 | 26.388 | -11.588 | -11.588 | 0.000 | 0.000 | 0.000 | 0.000 |
| 23 | A | 197 | GLN | 0 | -0.015 | -0.028 | 24.048 | 0.220 | 0.220 | 0.000 | 0.000 | 0.000 | 0.000 |
| 24 | A | 198 | LEU | 0 | -0.027 | -0.008 | 29.013 | 0.107 | 0.107 | 0.000 | 0.000 | 0.000 | 0.000 |
| 25 | A | 199 | GLY | 0 | 0.011 | 0.003 | 31.768 | 0.171 | 0.171 | 0.000 | 0.000 | 0.000 | 0.000 |
| 26 | A | 200 | LYS | 1 | 0.865 | 0.937 | 34.163 | 9.148 | 9.148 | 0.000 | 0.000 | 0.000 | 0.000 |
| 27 | A | 201 | TYR | 0 | -0.031 | -0.017 | 37.025 | 0.304 | 0.304 | 0.000 | 0.000 | 0.000 | 0.000 |
| 28 | A | 202 | THR | 0 | 0.014 | -0.001 | 40.309 | -0.091 | -0.091 | 0.000 | 0.000 | 0.000 | 0.000 |
| 29 | A | 203 | THR | 0 | 0.042 | 0.013 | 42.974 | 0.136 | 0.136 | 0.000 | 0.000 | 0.000 | 0.000 |
| 30 | A | 204 | ASN | 0 | 0.024 | 0.012 | 46.180 | -0.073 | -0.073 | 0.000 | 0.000 | 0.000 | 0.000 |
| 31 | A | 205 | SER | 0 | -0.002 | 0.001 | 48.205 | 0.070 | 0.070 | 0.000 | 0.000 | 0.000 | 0.000 |
| 32 | A | 206 | SER | 0 | -0.033 | -0.044 | 48.543 | -0.183 | -0.183 | 0.000 | 0.000 | 0.000 | 0.000 |
| 33 | A | 207 | ALA | 0 | 0.011 | 0.014 | 48.028 | -0.052 | -0.052 | 0.000 | 0.000 | 0.000 | 0.000 |
| 34 | A | 208 | ASP | -1 | -0.883 | -0.939 | 48.299 | -6.547 | -6.547 | 0.000 | 0.000 | 0.000 | 0.000 |
| 35 | A | 209 | HIS | 0 | -0.020 | -0.009 | 50.897 | 0.087 | 0.087 | 0.000 | 0.000 | 0.000 | 0.000 |
| 36 | A | 210 | ARG | 1 | 0.830 | 0.908 | 44.323 | 6.995 | 6.995 | 0.000 | 0.000 | 0.000 | 0.000 |
| 37 | A | 211 | VAL | 0 | -0.019 | -0.010 | 50.064 | 0.158 | 0.158 | 0.000 | 0.000 | 0.000 | 0.000 |
| 38 | A | 212 | ARG | 1 | 0.838 | 0.886 | 49.715 | 6.010 | 6.010 | 0.000 | 0.000 | 0.000 | 0.000 |
| 39 | A | 213 | LEU | 0 | 0.024 | 0.005 | 46.321 | -0.146 | -0.146 | 0.000 | 0.000 | 0.000 | 0.000 |
| 40 | A | 214 | ASP | -1 | -0.857 | -0.889 | 48.094 | -6.417 | -6.417 | 0.000 | 0.000 | 0.000 | 0.000 |
| 41 | A | 215 | LEU | 0 | 0.043 | 0.004 | 47.831 | -0.146 | -0.146 | 0.000 | 0.000 | 0.000 | 0.000 |
| 42 | A | 216 | GLY | 0 | 0.060 | 0.048 | 47.902 | -0.097 | -0.097 | 0.000 | 0.000 | 0.000 | 0.000 |
| 43 | A | 217 | LEU | 0 | -0.071 | -0.039 | 44.590 | -0.168 | -0.168 | 0.000 | 0.000 | 0.000 | 0.000 |
| 44 | A | 218 | TRP | 0 | 0.040 | 0.019 | 41.760 | -0.304 | -0.304 | 0.000 | 0.000 | 0.000 | 0.000 |
| 45 | A | 219 | ASP | -1 | -0.913 | -0.944 | 43.331 | -7.009 | -7.009 | 0.000 | 0.000 | 0.000 | 0.000 |
| 46 | A | 220 | LYS | 1 | 0.821 | 0.907 | 39.558 | 7.845 | 7.845 | 0.000 | 0.000 | 0.000 | 0.000 |
| 47 | A | 221 | PHE | 0 | -0.009 | -0.007 | 36.546 | -0.301 | -0.301 | 0.000 | 0.000 | 0.000 | 0.000 |
| 48 | A | 222 | SER | 0 | -0.005 | -0.007 | 38.531 | -0.282 | -0.282 | 0.000 | 0.000 | 0.000 | 0.000 |
| 49 | A | 223 | GLU | -1 | -0.837 | -0.906 | 39.023 | -8.146 | -8.146 | 0.000 | 0.000 | 0.000 | 0.000 |
| 50 | A | 224 | LEU | 0 | -0.060 | -0.040 | 35.753 | -0.296 | -0.296 | 0.000 | 0.000 | 0.000 | 0.000 |
| 51 | A | 225 | ALA | 0 | -0.001 | 0.006 | 34.481 | -0.364 | -0.364 | 0.000 | 0.000 | 0.000 | 0.000 |
| 52 | A | 226 | THR | 0 | -0.002 | -0.015 | 34.064 | -0.286 | -0.286 | 0.000 | 0.000 | 0.000 | 0.000 |
| 53 | A | 227 | LYS | 1 | 0.912 | 0.947 | 33.496 | 8.502 | 8.502 | 0.000 | 0.000 | 0.000 | 0.000 |
| 54 | A | 228 | CYS | 0 | -0.056 | -0.020 | 29.851 | -0.521 | -0.521 | 0.000 | 0.000 | 0.000 | 0.000 |
| 55 | A | 229 | ILE | 0 | 0.081 | 0.027 | 29.377 | -0.456 | -0.456 | 0.000 | 0.000 | 0.000 | 0.000 |
| 56 | A | 230 | ILE | 0 | -0.010 | 0.003 | 29.549 | -0.375 | -0.375 | 0.000 | 0.000 | 0.000 | 0.000 |
| 57 | A | 231 | LYS | 1 | 0.908 | 0.960 | 26.612 | 11.166 | 11.166 | 0.000 | 0.000 | 0.000 | 0.000 |
| 58 | A | 232 | ILE | 0 | 0.006 | 0.009 | 25.191 | -0.631 | -0.631 | 0.000 | 0.000 | 0.000 | 0.000 |
| 59 | A | 233 | VAL | 0 | 0.023 | 0.011 | 24.811 | -0.535 | -0.535 | 0.000 | 0.000 | 0.000 | 0.000 |
| 60 | A | 234 | GLU | -1 | -0.886 | -0.948 | 24.461 | -13.115 | -13.115 | 0.000 | 0.000 | 0.000 | 0.000 |
| 61 | A | 235 | PHE | 0 | -0.039 | -0.015 | 18.525 | -0.643 | -0.643 | 0.000 | 0.000 | 0.000 | 0.000 |
| 62 | A | 236 | ALA | 0 | 0.059 | 0.022 | 20.290 | -0.891 | -0.891 | 0.000 | 0.000 | 0.000 | 0.000 |
| 63 | A | 237 | LYS | 1 | 0.853 | 0.916 | 20.532 | 11.979 | 11.979 | 0.000 | 0.000 | 0.000 | 0.000 |
| 64 | A | 238 | ARG | 1 | 0.765 | 0.878 | 17.630 | 14.568 | 14.568 | 0.000 | 0.000 | 0.000 | 0.000 |
| 65 | A | 239 | LEU | 0 | -0.013 | 0.010 | 16.006 | -1.612 | -1.612 | 0.000 | 0.000 | 0.000 | 0.000 |
| 66 | A | 240 | PRO | 0 | -0.016 | -0.022 | 11.944 | 0.673 | 0.673 | 0.000 | 0.000 | 0.000 | 0.000 |
| 67 | A | 241 | GLY | 0 | 0.030 | 0.017 | 14.872 | -0.219 | -0.219 | 0.000 | 0.000 | 0.000 | 0.000 |
| 68 | A | 242 | PHE | 0 | 0.032 | 0.024 | 17.118 | 0.989 | 0.989 | 0.000 | 0.000 | 0.000 | 0.000 |
| 69 | A | 243 | THR | 0 | -0.027 | -0.031 | 20.039 | 0.888 | 0.888 | 0.000 | 0.000 | 0.000 | 0.000 |
| 70 | A | 244 | GLY | 0 | -0.017 | -0.001 | 20.653 | 0.573 | 0.573 | 0.000 | 0.000 | 0.000 | 0.000 |
| 71 | A | 245 | LEU | 0 | -0.012 | 0.010 | 20.604 | 0.165 | 0.165 | 0.000 | 0.000 | 0.000 | 0.000 |
| 72 | A | 246 | THR | 0 | 0.025 | -0.001 | 23.693 | 0.097 | 0.097 | 0.000 | 0.000 | 0.000 | 0.000 |
| 73 | A | 247 | ILE | 0 | -0.001 | -0.020 | 27.306 | -0.186 | -0.186 | 0.000 | 0.000 | 0.000 | 0.000 |
| 74 | A | 248 | ALA | 0 | 0.041 | 0.037 | 29.448 | 0.043 | 0.043 | 0.000 | 0.000 | 0.000 | 0.000 |
| 75 | A | 249 | ASP | -1 | -0.703 | -0.833 | 25.895 | -11.788 | -11.788 | 0.000 | 0.000 | 0.000 | 0.000 |
| 76 | A | 250 | GLN | 0 | -0.059 | -0.031 | 24.344 | -0.086 | -0.086 | 0.000 | 0.000 | 0.000 | 0.000 |
| 77 | A | 251 | ILE | 0 | -0.009 | -0.014 | 26.518 | -0.093 | -0.093 | 0.000 | 0.000 | 0.000 | 0.000 |
| 78 | A | 252 | THR | 0 | 0.026 | 0.017 | 29.280 | 0.174 | 0.174 | 0.000 | 0.000 | 0.000 | 0.000 |
| 79 | A | 253 | LEU | 0 | -0.027 | -0.012 | 22.769 | -0.011 | -0.011 | 0.000 | 0.000 | 0.000 | 0.000 |
| 80 | A | 254 | LEU | 0 | -0.046 | -0.033 | 25.592 | -0.019 | -0.019 | 0.000 | 0.000 | 0.000 | 0.000 |
| 81 | A | 255 | LYS | 1 | 0.787 | 0.873 | 27.786 | 9.091 | 9.091 | 0.000 | 0.000 | 0.000 | 0.000 |
| 82 | A | 256 | ALA | 0 | 0.026 | 0.027 | 28.527 | 0.193 | 0.193 | 0.000 | 0.000 | 0.000 | 0.000 |
| 83 | A | 257 | ALA | 0 | -0.005 | 0.014 | 25.557 | -0.013 | -0.013 | 0.000 | 0.000 | 0.000 | 0.000 |
| 84 | A | 258 | CYS | 0 | -0.041 | -0.014 | 27.442 | -0.149 | -0.149 | 0.000 | 0.000 | 0.000 | 0.000 |
| 85 | A | 259 | LEU | 0 | 0.040 | 0.004 | 28.877 | -0.004 | -0.004 | 0.000 | 0.000 | 0.000 | 0.000 |
| 86 | A | 260 | ASP | -1 | -0.803 | -0.890 | 26.853 | -11.153 | -11.153 | 0.000 | 0.000 | 0.000 | 0.000 |
| 87 | A | 261 | ILE | 0 | 0.018 | -0.004 | 23.167 | -0.078 | -0.078 | 0.000 | 0.000 | 0.000 | 0.000 |
| 88 | A | 262 | LEU | 0 | -0.022 | -0.013 | 26.442 | -0.024 | -0.024 | 0.000 | 0.000 | 0.000 | 0.000 |
| 89 | A | 263 | ILE | 0 | -0.020 | 0.002 | 29.765 | 0.141 | 0.141 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90 | A | 264 | LEU | 0 | 0.016 | 0.014 | 22.581 | 0.128 | 0.128 | 0.000 | 0.000 | 0.000 | 0.000 |
| 91 | A | 265 | ARG | 1 | 0.862 | 0.934 | 22.514 | 13.227 | 13.227 | 0.000 | 0.000 | 0.000 | 0.000 |
| 92 | A | 266 | ILE | 0 | -0.010 | 0.006 | 27.455 | 0.066 | 0.066 | 0.000 | 0.000 | 0.000 | 0.000 |
| 93 | A | 267 | CYS | 0 | -0.014 | -0.007 | 29.115 | 0.281 | 0.281 | 0.000 | 0.000 | 0.000 | 0.000 |
| 94 | A | 268 | THR | 0 | -0.075 | -0.050 | 24.396 | -0.068 | -0.068 | 0.000 | 0.000 | 0.000 | 0.000 |
| 95 | A | 269 | ARG | 1 | 0.782 | 0.875 | 27.628 | 10.837 | 10.837 | 0.000 | 0.000 | 0.000 | 0.000 |
| 96 | A | 270 | TYR | 0 | -0.055 | -0.033 | 30.557 | 0.344 | 0.344 | 0.000 | 0.000 | 0.000 | 0.000 |
| 97 | A | 271 | THR | 0 | -0.025 | -0.018 | 32.357 | -0.209 | -0.209 | 0.000 | 0.000 | 0.000 | 0.000 |
| 98 | A | 272 | PRO | 0 | 0.021 | 0.003 | 33.716 | 0.270 | 0.270 | 0.000 | 0.000 | 0.000 | 0.000 |
| 99 | A | 273 | GLU | -1 | -0.922 | -0.950 | 36.636 | -7.663 | -7.663 | 0.000 | 0.000 | 0.000 | 0.000 |
| 100 | A | 274 | GLN | 0 | -0.051 | -0.030 | 38.842 | 0.190 | 0.190 | 0.000 | 0.000 | 0.000 | 0.000 |
| 101 | A | 275 | ASP | -1 | -0.761 | -0.839 | 38.943 | -7.908 | -7.908 | 0.000 | 0.000 | 0.000 | 0.000 |
| 102 | A | 276 | THR | 0 | -0.013 | -0.011 | 38.154 | 0.082 | 0.082 | 0.000 | 0.000 | 0.000 | 0.000 |
| 103 | A | 277 | MET | 0 | -0.029 | 0.002 | 34.003 | -0.299 | -0.299 | 0.000 | 0.000 | 0.000 | 0.000 |
| 104 | A | 278 | THR | 0 | -0.012 | -0.006 | 33.095 | 0.232 | 0.232 | 0.000 | 0.000 | 0.000 | 0.000 |
| 105 | A | 279 | PHE | 0 | 0.055 | 0.017 | 32.692 | -0.431 | -0.431 | 0.000 | 0.000 | 0.000 | 0.000 |
| 106 | A | 280 | SER | 0 | 0.002 | -0.015 | 29.954 | -0.053 | -0.053 | 0.000 | 0.000 | 0.000 | 0.000 |
| 107 | A | 281 | ASP | -1 | -0.764 | -0.868 | 32.041 | -8.690 | -8.690 | 0.000 | 0.000 | 0.000 | 0.000 |
| 108 | A | 282 | GLY | 0 | 0.037 | 0.029 | 34.616 | 0.149 | 0.149 | 0.000 | 0.000 | 0.000 | 0.000 |
| 109 | A | 283 | LEU | 0 | -0.016 | 0.013 | 35.789 | 0.144 | 0.144 | 0.000 | 0.000 | 0.000 | 0.000 |
| 110 | A | 284 | THR | 0 | -0.040 | -0.024 | 37.220 | -0.328 | -0.328 | 0.000 | 0.000 | 0.000 | 0.000 |
| 111 | A | 285 | LEU | 0 | 0.002 | 0.012 | 38.703 | 0.244 | 0.244 | 0.000 | 0.000 | 0.000 | 0.000 |
| 112 | A | 286 | ASN | 0 | 0.046 | 0.010 | 39.807 | -0.252 | -0.252 | 0.000 | 0.000 | 0.000 | 0.000 |
| 113 | A | 287 | ARG | 1 | 0.836 | 0.875 | 39.542 | 7.896 | 7.896 | 0.000 | 0.000 | 0.000 | 0.000 |
| 114 | A | 288 | THR | 0 | -0.026 | -0.013 | 42.170 | -0.026 | -0.026 | 0.000 | 0.000 | 0.000 | 0.000 |
| 115 | A | 289 | GLN | 0 | 0.007 | -0.005 | 43.666 | -0.110 | -0.110 | 0.000 | 0.000 | 0.000 | 0.000 |
| 116 | A | 290 | MET | 0 | -0.008 | -0.002 | 36.671 | -0.018 | -0.018 | 0.000 | 0.000 | 0.000 | 0.000 |
| 117 | A | 291 | HIS | 0 | -0.050 | -0.025 | 41.630 | -0.008 | -0.008 | 0.000 | 0.000 | 0.000 | 0.000 |
| 118 | A | 292 | ASN | 0 | 0.031 | 0.000 | 44.045 | 0.014 | 0.014 | 0.000 | 0.000 | 0.000 | 0.000 |
| 119 | A | 293 | ALA | 0 | 0.045 | 0.023 | 42.076 | 0.097 | 0.097 | 0.000 | 0.000 | 0.000 | 0.000 |
| 120 | A | 294 | GLY | 0 | 0.052 | 0.022 | 43.354 | -0.061 | -0.061 | 0.000 | 0.000 | 0.000 | 0.000 |
| 121 | A | 295 | PHE | 0 | -0.009 | 0.004 | 36.002 | -0.026 | -0.026 | 0.000 | 0.000 | 0.000 | 0.000 |
| 122 | A | 296 | GLY | 0 | 0.058 | 0.038 | 41.559 | 0.004 | 0.004 | 0.000 | 0.000 | 0.000 | 0.000 |
| 123 | A | 297 | PRO | 0 | 0.007 | 0.001 | 43.895 | -0.090 | -0.090 | 0.000 | 0.000 | 0.000 | 0.000 |
| 124 | A | 298 | LEU | 0 | -0.001 | -0.001 | 38.557 | -0.090 | -0.090 | 0.000 | 0.000 | 0.000 | 0.000 |
| 125 | A | 299 | THR | 0 | -0.015 | -0.017 | 39.114 | -0.248 | -0.248 | 0.000 | 0.000 | 0.000 | 0.000 |
| 126 | A | 300 | ASP | -1 | -0.756 | -0.860 | 39.047 | -7.632 | -7.632 | 0.000 | 0.000 | 0.000 | 0.000 |
| 127 | A | 301 | LEU | 0 | -0.008 | 0.018 | 36.148 | -0.123 | -0.123 | 0.000 | 0.000 | 0.000 | 0.000 |
| 128 | A | 302 | VAL | 0 | 0.020 | 0.009 | 34.029 | -0.279 | -0.279 | 0.000 | 0.000 | 0.000 | 0.000 |
| 129 | A | 303 | PHE | 0 | 0.022 | -0.006 | 34.320 | -0.281 | -0.281 | 0.000 | 0.000 | 0.000 | 0.000 |
| 130 | A | 304 | THR | 0 | -0.080 | -0.048 | 35.523 | -0.178 | -0.178 | 0.000 | 0.000 | 0.000 | 0.000 |
| 131 | A | 305 | PHE | 0 | 0.005 | -0.002 | 27.210 | -0.198 | -0.198 | 0.000 | 0.000 | 0.000 | 0.000 |
| 132 | A | 306 | ALA | 0 | 0.061 | 0.017 | 30.711 | -0.326 | -0.326 | 0.000 | 0.000 | 0.000 | 0.000 |
| 133 | A | 307 | ASN | 0 | 0.009 | -0.006 | 30.979 | -0.293 | -0.293 | 0.000 | 0.000 | 0.000 | 0.000 |
| 134 | A | 308 | GLN | 0 | -0.070 | -0.035 | 30.965 | -0.260 | -0.260 | 0.000 | 0.000 | 0.000 | 0.000 |
| 135 | A | 309 | LEU | 0 | -0.016 | -0.001 | 24.977 | -0.368 | -0.368 | 0.000 | 0.000 | 0.000 | 0.000 |
| 136 | A | 310 | LEU | 0 | 0.015 | 0.010 | 26.597 | -0.451 | -0.451 | 0.000 | 0.000 | 0.000 | 0.000 |
| 137 | A | 311 | PRO | 0 | -0.040 | -0.022 | 27.326 | -0.317 | -0.317 | 0.000 | 0.000 | 0.000 | 0.000 |
| 138 | A | 312 | LEU | 0 | -0.093 | -0.045 | 22.965 | -0.223 | -0.223 | 0.000 | 0.000 | 0.000 | 0.000 |
| 139 | A | 313 | GLU | -1 | -1.002 | -0.991 | 22.386 | -13.271 | -13.271 | 0.000 | 0.000 | 0.000 | 0.000 |
| 140 | A | 314 | MET | 0 | -0.021 | -0.003 | 19.721 | -0.388 | -0.388 | 0.000 | 0.000 | 0.000 | 0.000 |
| 141 | A | 315 | ASP | -1 | -0.739 | -0.839 | 16.435 | -18.956 | -18.956 | 0.000 | 0.000 | 0.000 | 0.000 |
| 142 | A | 316 | ASP | -1 | -0.798 | -0.899 | 17.335 | -15.818 | -15.818 | 0.000 | 0.000 | 0.000 | 0.000 |
| 143 | A | 317 | THR | 0 | -0.075 | -0.029 | 12.766 | -0.798 | -0.798 | 0.000 | 0.000 | 0.000 | 0.000 |
| 144 | A | 318 | GLU | -1 | -0.783 | -0.899 | 14.986 | -18.477 | -18.477 | 0.000 | 0.000 | 0.000 | 0.000 |
| 145 | A | 319 | THR | 0 | 0.013 | -0.007 | 16.490 | 0.568 | 0.568 | 0.000 | 0.000 | 0.000 | 0.000 |
| 146 | A | 320 | GLY | 0 | 0.019 | 0.020 | 16.924 | 0.532 | 0.532 | 0.000 | 0.000 | 0.000 | 0.000 |
| 147 | A | 321 | LEU | 0 | -0.015 | -0.024 | 11.313 | 0.129 | 0.129 | 0.000 | 0.000 | 0.000 | 0.000 |
| 148 | A | 322 | LEU | 0 | -0.014 | 0.006 | 15.555 | 0.356 | 0.356 | 0.000 | 0.000 | 0.000 | 0.000 |
| 149 | A | 323 | SER | 0 | 0.008 | -0.016 | 18.935 | 0.910 | 0.910 | 0.000 | 0.000 | 0.000 | 0.000 |
| 150 | A | 324 | ALA | 0 | -0.020 | -0.012 | 16.257 | 0.509 | 0.509 | 0.000 | 0.000 | 0.000 | 0.000 |
| 151 | A | 325 | ILE | 0 | -0.024 | -0.014 | 15.371 | 0.258 | 0.258 | 0.000 | 0.000 | 0.000 | 0.000 |
| 152 | A | 326 | CYS | 0 | -0.072 | -0.023 | 18.902 | 0.767 | 0.767 | 0.000 | 0.000 | 0.000 | 0.000 |
| 153 | A | 327 | LEU | 0 | -0.025 | -0.007 | 21.050 | 0.572 | 0.572 | 0.000 | 0.000 | 0.000 | 0.000 |
| 154 | A | 328 | ILE | 0 | -0.049 | -0.020 | 17.569 | 0.457 | 0.457 | 0.000 | 0.000 | 0.000 | 0.000 |
| 155 | A | 329 | CYS | 0 | -0.046 | -0.039 | 20.061 | -0.620 | -0.620 | 0.000 | 0.000 | 0.000 | 0.000 |
| 156 | A | 330 | GLY | 0 | 0.065 | 0.018 | 22.560 | 0.414 | 0.414 | 0.000 | 0.000 | 0.000 | 0.000 |
| 157 | A | 331 | ASP | -1 | -0.901 | -0.942 | 24.038 | -11.684 | -11.684 | 0.000 | 0.000 | 0.000 | 0.000 |
| 158 | A | 332 | ARG | 1 | 0.838 | 0.932 | 25.560 | 12.405 | 12.405 | 0.000 | 0.000 | 0.000 | 0.000 |
| 159 | A | 333 | GLN | 0 | -0.004 | -0.020 | 28.788 | 0.053 | 0.053 | 0.000 | 0.000 | 0.000 | 0.000 |
| 160 | A | 334 | ASP | -1 | -0.904 | -0.964 | 31.549 | -9.264 | -9.264 | 0.000 | 0.000 | 0.000 | 0.000 |
| 161 | A | 335 | LEU | 0 | -0.066 | -0.002 | 25.878 | -0.139 | -0.139 | 0.000 | 0.000 | 0.000 | 0.000 |
| 162 | A | 336 | GLU | -1 | -0.877 | -0.925 | 29.249 | -10.153 | -10.153 | 0.000 | 0.000 | 0.000 | 0.000 |
| 163 | A | 337 | GLU | -1 | -0.872 | -0.949 | 24.631 | -13.161 | -13.161 | 0.000 | 0.000 | 0.000 | 0.000 |
| 164 | A | 338 | PRO | 0 | 0.056 | 0.035 | 24.202 | -0.764 | -0.764 | 0.000 | 0.000 | 0.000 | 0.000 |
| 165 | A | 339 | THR | 0 | -0.007 | -0.012 | 22.952 | -0.718 | -0.718 | 0.000 | 0.000 | 0.000 | 0.000 |
| 166 | A | 340 | LYS | 1 | 0.740 | 0.864 | 20.060 | 13.326 | 13.326 | 0.000 | 0.000 | 0.000 | 0.000 |
| 167 | A | 341 | VAL | 0 | 0.014 | 0.009 | 19.111 | -1.120 | -1.120 | 0.000 | 0.000 | 0.000 | 0.000 |
| 168 | A | 342 | ASP | -1 | -0.854 | -0.935 | 19.085 | -15.186 | -15.186 | 0.000 | 0.000 | 0.000 | 0.000 |
| 169 | A | 343 | LYS | 1 | 0.895 | 0.939 | 15.902 | 15.624 | 15.624 | 0.000 | 0.000 | 0.000 | 0.000 |
| 170 | A | 344 | LEU | 0 | -0.030 | 0.003 | 14.506 | -1.657 | -1.657 | 0.000 | 0.000 | 0.000 | 0.000 |
| 171 | A | 345 | GLN | 0 | 0.037 | 0.001 | 14.634 | -1.071 | -1.071 | 0.000 | 0.000 | 0.000 | 0.000 |
| 172 | A | 346 | GLU | -1 | -0.970 | -0.975 | 12.911 | -22.260 | -22.260 | 0.000 | 0.000 | 0.000 | 0.000 |
| 173 | A | 347 | PRO | 0 | 0.001 | -0.010 | 9.213 | -1.205 | -1.205 | 0.000 | 0.000 | 0.000 | 0.000 |
| 174 | A | 348 | LEU | 0 | 0.008 | 0.008 | 10.018 | -2.224 | -2.224 | 0.000 | 0.000 | 0.000 | 0.000 |
| 175 | A | 349 | LEU | 0 | 0.022 | 0.009 | 12.456 | 0.088 | 0.088 | 0.000 | 0.000 | 0.000 | 0.000 |
| 176 | A | 350 | GLU | -1 | -0.917 | -0.957 | 8.592 | -32.129 | -32.129 | 0.000 | 0.000 | 0.000 | 0.000 |
| 177 | A | 351 | ALA | 0 | 0.002 | 0.004 | 7.935 | -1.162 | -1.162 | 0.000 | 0.000 | 0.000 | 0.000 |
| 178 | A | 352 | LEU | 0 | -0.004 | 0.004 | 8.933 | 0.373 | 0.373 | 0.000 | 0.000 | 0.000 | 0.000 |
| 179 | A | 353 | LYS | 1 | 0.913 | 0.941 | 11.548 | 21.164 | 21.164 | 0.000 | 0.000 | 0.000 | 0.000 |
| 180 | A | 354 | ILE | 0 | -0.008 | -0.002 | 6.188 | 1.906 | 1.906 | 0.000 | 0.000 | 0.000 | 0.000 |
| 181 | A | 355 | TYR | 0 | -0.062 | -0.073 | 9.626 | 0.515 | 0.515 | 0.000 | 0.000 | 0.000 | 0.000 |
| 182 | A | 356 | ILE | 0 | 0.006 | -0.004 | 10.695 | 1.635 | 1.635 | 0.000 | 0.000 | 0.000 | 0.000 |
| 183 | A | 357 | ARG | 1 | 0.911 | 0.948 | 12.817 | 19.832 | 19.832 | 0.000 | 0.000 | 0.000 | 0.000 |
| 184 | A | 358 | LYS | 1 | 0.890 | 0.993 | 9.244 | 26.306 | 26.306 | 0.000 | 0.000 | 0.000 | 0.000 |
| 185 | A | 359 | ARG | 1 | 0.875 | 0.924 | 12.354 | 17.654 | 17.654 | 0.000 | 0.000 | 0.000 | 0.000 |
| 186 | A | 360 | ARG | 1 | 1.002 | 1.012 | 15.676 | 14.706 | 14.706 | 0.000 | 0.000 | 0.000 | 0.000 |
| 187 | A | 361 | PRO | 0 | -0.047 | -0.022 | 16.774 | 0.639 | 0.639 | 0.000 | 0.000 | 0.000 | 0.000 |
| 188 | A | 362 | SER | 0 | 0.024 | 0.029 | 16.008 | 0.199 | 0.199 | 0.000 | 0.000 | 0.000 | 0.000 |
| 189 | A | 363 | LYS | 1 | 0.954 | 0.957 | 17.888 | 13.555 | 13.555 | 0.000 | 0.000 | 0.000 | 0.000 |
| 190 | A | 364 | PRO | 0 | -0.020 | -0.013 | 20.887 | -0.006 | -0.006 | 0.000 | 0.000 | 0.000 | 0.000 |
| 191 | A | 365 | HIS | 0 | 0.042 | 0.024 | 21.034 | -0.789 | -0.789 | 0.000 | 0.000 | 0.000 | 0.000 |
| 192 | A | 366 | MET | 0 | -0.008 | -0.007 | 19.694 | 0.585 | 0.585 | 0.000 | 0.000 | 0.000 | 0.000 |
| 193 | A | 367 | PHE | 0 | 0.060 | 0.032 | 15.071 | 0.360 | 0.360 | 0.000 | 0.000 | 0.000 | 0.000 |
| 194 | A | 368 | PRO | 0 | 0.025 | 0.011 | 18.566 | 0.023 | 0.023 | 0.000 | 0.000 | 0.000 | 0.000 |
| 195 | A | 369 | LYS | 1 | 0.937 | 0.965 | 21.537 | 12.501 | 12.501 | 0.000 | 0.000 | 0.000 | 0.000 |
| 196 | A | 370 | ILE | 0 | 0.074 | 0.033 | 18.702 | 0.445 | 0.445 | 0.000 | 0.000 | 0.000 | 0.000 |
| 197 | A | 371 | LEU | 0 | 0.023 | 0.011 | 17.581 | 0.232 | 0.232 | 0.000 | 0.000 | 0.000 | 0.000 |
| 198 | A | 372 | MET | 0 | -0.034 | -0.018 | 21.556 | 0.551 | 0.551 | 0.000 | 0.000 | 0.000 | 0.000 |
| 199 | A | 373 | LYS | 1 | 0.875 | 0.944 | 24.134 | 11.706 | 11.706 | 0.000 | 0.000 | 0.000 | 0.000 |
| 200 | A | 374 | ILE | 0 | 0.059 | 0.034 | 20.756 | 0.326 | 0.326 | 0.000 | 0.000 | 0.000 | 0.000 |
| 201 | A | 375 | THR | 0 | -0.023 | -0.011 | 25.332 | 0.323 | 0.323 | 0.000 | 0.000 | 0.000 | 0.000 |
| 202 | A | 376 | ASP | -1 | -0.838 | -0.917 | 28.509 | -10.336 | -10.336 | 0.000 | 0.000 | 0.000 | 0.000 |
| 203 | A | 377 | LEU | 0 | -0.029 | -0.008 | 25.823 | 0.404 | 0.404 | 0.000 | 0.000 | 0.000 | 0.000 |
| 204 | A | 378 | ARG | 1 | 0.985 | 1.002 | 28.835 | 10.402 | 10.402 | 0.000 | 0.000 | 0.000 | 0.000 |
| 205 | A | 379 | SER | 0 | -0.076 | -0.054 | 30.554 | 0.429 | 0.429 | 0.000 | 0.000 | 0.000 | 0.000 |
| 206 | A | 380 | ILE | 0 | -0.050 | -0.022 | 31.971 | 0.384 | 0.384 | 0.000 | 0.000 | 0.000 | 0.000 |
| 207 | A | 381 | SER | 0 | -0.004 | -0.024 | 30.842 | 0.398 | 0.398 | 0.000 | 0.000 | 0.000 | 0.000 |
| 208 | A | 382 | ALA | 0 | 0.034 | 0.023 | 33.671 | 0.227 | 0.227 | 0.000 | 0.000 | 0.000 | 0.000 |
| 209 | A | 383 | LYS | 1 | 0.910 | 0.956 | 36.000 | 8.454 | 8.454 | 0.000 | 0.000 | 0.000 | 0.000 |
| 210 | A | 384 | GLY | 0 | 0.015 | 0.009 | 37.240 | 0.221 | 0.221 | 0.000 | 0.000 | 0.000 | 0.000 |
| 211 | A | 385 | ALA | 0 | 0.043 | 0.025 | 38.357 | 0.153 | 0.153 | 0.000 | 0.000 | 0.000 | 0.000 |
| 212 | A | 386 | GLU | -1 | -0.911 | -0.954 | 40.379 | -6.968 | -6.968 | 0.000 | 0.000 | 0.000 | 0.000 |
| 213 | A | 387 | ARG | 1 | 0.815 | 0.916 | 41.064 | 7.368 | 7.368 | 0.000 | 0.000 | 0.000 | 0.000 |
| 214 | A | 388 | VAL | 0 | 0.036 | 0.011 | 39.464 | 0.147 | 0.147 | 0.000 | 0.000 | 0.000 | 0.000 |
| 215 | A | 389 | ILE | 0 | 0.006 | 0.009 | 42.693 | 0.152 | 0.152 | 0.000 | 0.000 | 0.000 | 0.000 |
| 216 | A | 390 | THR | 0 | -0.061 | -0.047 | 45.800 | 0.206 | 0.206 | 0.000 | 0.000 | 0.000 | 0.000 |
| 217 | A | 391 | LEU | 0 | -0.032 | -0.017 | 42.547 | 0.132 | 0.132 | 0.000 | 0.000 | 0.000 | 0.000 |
| 218 | A | 392 | LYS | 1 | 0.889 | 0.943 | 44.128 | 7.314 | 7.314 | 0.000 | 0.000 | 0.000 | 0.000 |
| 219 | A | 393 | MET | 0 | -0.036 | 0.002 | 47.904 | 0.149 | 0.149 | 0.000 | 0.000 | 0.000 | 0.000 |
| 220 | A | 394 | GLU | -1 | -0.840 | -0.903 | 48.640 | -6.452 | -6.452 | 0.000 | 0.000 | 0.000 | 0.000 |
| 221 | A | 395 | ILE | 0 | -0.038 | -0.013 | 46.421 | 0.085 | 0.085 | 0.000 | 0.000 | 0.000 | 0.000 |
| 222 | A | 396 | PRO | 0 | -0.006 | -0.002 | 50.395 | 0.048 | 0.048 | 0.000 | 0.000 | 0.000 | 0.000 |
| 223 | A | 397 | GLY | 0 | 0.007 | 0.011 | 50.304 | 0.088 | 0.088 | 0.000 | 0.000 | 0.000 | 0.000 |
| 224 | A | 398 | SER | 0 | -0.010 | -0.008 | 47.299 | -0.007 | -0.007 | 0.000 | 0.000 | 0.000 | 0.000 |
| 225 | A | 399 | MET | 0 | -0.001 | 0.003 | 42.172 | -0.094 | -0.094 | 0.000 | 0.000 | 0.000 | 0.000 |
| 226 | A | 400 | PRO | 0 | 0.039 | 0.013 | 40.584 | -0.016 | -0.016 | 0.000 | 0.000 | 0.000 | 0.000 |
| 227 | A | 401 | PRO | 0 | 0.039 | 0.016 | 40.426 | -0.141 | -0.141 | 0.000 | 0.000 | 0.000 | 0.000 |
| 228 | A | 402 | LEU | 0 | 0.011 | 0.004 | 34.279 | -0.097 | -0.097 | 0.000 | 0.000 | 0.000 | 0.000 |
| 229 | A | 403 | ILE | 0 | -0.009 | -0.004 | 36.226 | -0.204 | -0.204 | 0.000 | 0.000 | 0.000 | 0.000 |
| 230 | A | 404 | GLN | 0 | -0.070 | -0.042 | 37.981 | 0.082 | 0.082 | 0.000 | 0.000 | 0.000 | 0.000 |
| 231 | A | 405 | GLU | -1 | -0.803 | -0.906 | 36.166 | -8.734 | -8.734 | 0.000 | 0.000 | 0.000 | 0.000 |
| 232 | A | 406 | MET | 0 | -0.070 | -0.017 | 32.864 | -0.238 | -0.238 | 0.000 | 0.000 | 0.000 | 0.000 |
| 233 | A | 407 | LEU | 0 | -0.030 | -0.026 | 35.067 | -0.140 | -0.140 | 0.000 | 0.000 | 0.000 | 0.000 |
| 234 | A | 408 | GLU | -1 | -0.934 | -0.939 | 37.836 | -7.523 | -7.523 | 0.000 | 0.000 | 0.000 | 0.000 |
| 235 | A | 409 | ASN | -1 | -0.946 | -0.964 | 35.581 | -8.587 | -8.587 | 0.000 | 0.000 | 0.000 | 0.000 |