FMODB

FMODB: The database of quantum mechanical data based on the FMO method

Last updated: 2025-10-17

All entries: 77277

Number of unique PDB entries: 32023

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FMODB ID: NZ6QQ

Calculation Name: 1FTZ-A-Other547

Preferred Name:

Target Type:

Ligand Name:

Ligand 3-letter code:

Ligand of Interest (LOI):

Structure Source: PDB

PDB ID: 1FTZ

Chain ID: A

ChEMBL ID:

UniProt ID: P02835

Base Structure: SolutionNMR

Registration Date: 2025-09-02

Reference: Sci Data 11, 1164 (2024).

DOI: https://doi.org/10.1038/s41597-024-03999-2

Apendix: None


IFIE MAP

IFIE Diagram


Modeling method
Optimization MOE:Amber10:EHT
Restraint OptAll
Protonation MOE:Protonate 3D
Complement MOE:Homology Modeling
Water No
Procedure Manual calculation
Remarks
ac.sh, 23 2024 Oct; Missing atoms/residues were imported from a 100% homology model, which was constructed by MOE.
FMO calculation
FMO method FMO2-MP2/6-31G(d)
Fragmentation Auto
Number of fragment 70
LigandResidueName
LigandFragmentNumber 0
LigandCharge
Software ABINIT-MP - Open Ver. 1 Rev. 23 (BINDS Ver. 1) / 20230922
Total energy (hartree)
FMO2-HF: Electronic energy -475657.917061
FMO2-HF: Nuclear repulsion 445010.138317
FMO2-HF: Total energy -30647.778744
FMO2-MP2: Total energy -30737.711405


3D Structure Molmil
Snapshot
 
Ligand structure

ligand structure
Ligand Interaction
ligand interaction
Ligand binding energy
IFIE [kcal/mol] PIEDA [kcal/mol] Charge transfer value [e]
IFIE SUMIFIE SUM at MP2 level. ESElectro static interaction energy. EXExchange-repulsion energy. CT+mixCharge transfer and mixing terms energy. DI(MP2)Dispersion energy. q(I=>J)Charge transfer value from I to J fragments.
N/AN/AN/AN/AN/AN/A


Interactive mode: IFIE and PIEDA for fragment #1(A:-1:MET)


Summations of interaction energy for fragment #1(A:-1:MET)
IFIE [kcal/mol] PIEDA [kcal/mol] Charge transfer value [e]
IFIE SUMIFIE SUM at MP2 level. ESElectro static interaction energy. EXExchange-repulsion energy. CT+mixCharge transfer and mixing terms energy. DI(MP2)Dispersion energy. q(I=>J)Charge transfer value from I to J fragments.
153.861155.6060.094-0.909-0.93-0.003
Interaction energy analysis for fragmet #1(A:-1:MET)
Snapshot

IFIE Diagram

Base fragment(s) of PIEDA/IFIE
Single fragment Multi fragments
Fragment list
Charge [e] FCHARGE : 1 / q_Mulliken : 0.871 / q_NPA : 0.932
Distance from base fragment(s) [Å]
Dist
Interaction energy by IFIE and PIEDA
[kcal/mol]
| Total | > | ES | > | EX | >
| CT+mix | > | DI(MP2) | >
Fragment charge [e]
FCHARGE q_Mulliken
q_NPA q(I=>J)
Residue
Res #    RES   
Sort
Graph Options
X Axis Label
Y Axis Max Y Axis Min
Display   
frag_NumFragment number. ChainChain species. Res #Residue number. RES3-letter code of amino acid residue, ligand and solvent molecule. FCHARGEFormal charge [e]. q_MullikenFragment charge evaluated by Mulliken charge [e]. q_NPAFragment charge evaluated by natural population analysis(NPA) charge [e]. DISTDistance from Ligand [Å]. TotalIFIE at MP2 level [kcal/mol]. ESElectro static interaction energy by PIEDA [kcal/mol]. EXExchange-repulsion energy by PIEDA [kcal/mol]. CT+mixCharge transfer and mixing terms energy by PIEDA [kcal/mol]. DI(MP2)Dispersion energy by PIEDA [kcal/mol]. q(I=>J)Charge transfer value from I to J fragmens [e].
3A1SER0-0.003-0.0073.182-3.081-1.3360.094-0.909-0.930-0.003
4A2LYS10.8260.8785.94738.11938.1190.0000.0000.0000.000
5A3ARG10.8740.9479.27625.66825.6680.0000.0000.0000.000
6A4THR00.0420.03311.2110.8160.8160.0000.0000.0000.000
7A5ARG11.0381.01014.67219.51119.5110.0000.0000.0000.000
8A6GLN00.0320.02416.8851.5411.5410.0000.0000.0000.000
9A7THR0-0.0110.00517.637-0.954-0.9540.0000.0000.0000.000
10A8TYR00.1110.04118.974-0.579-0.5790.0000.0000.0000.000
11A9THR00.0470.03718.0610.3580.3580.0000.0000.0000.000
12A10ARG10.9890.98521.31011.61011.6100.0000.0000.0000.000
13A11TYR00.0220.00016.9550.1860.1860.0000.0000.0000.000
14A12GLN00.0530.01317.0921.0101.0100.0000.0000.0000.000
15A13THR0-0.021-0.03020.9910.3810.3810.0000.0000.0000.000
16A14LEU0-0.035-0.00824.2680.5330.5330.0000.0000.0000.000
17A15GLU-1-0.832-0.91820.064-15.205-15.2050.0000.0000.0000.000
18A16LEU00.0180.01122.8660.2690.2690.0000.0000.0000.000
19A17GLU-1-0.805-0.87425.549-9.340-9.3400.0000.0000.0000.000
20A18LYS10.9130.96625.22211.79211.7920.0000.0000.0000.000
21A19GLU-1-0.722-0.83526.134-11.598-11.5980.0000.0000.0000.000
22A20PHE0-0.049-0.03928.2660.3330.3330.0000.0000.0000.000
23A21HIS0-0.030-0.02730.9880.1590.1590.0000.0000.0000.000
24A22PHE0-0.0180.02129.7200.2770.2770.0000.0000.0000.000
25A23ASN0-0.018-0.02129.7690.4970.4970.0000.0000.0000.000
26A24ARG11.0241.01231.6337.9457.9450.0000.0000.0000.000
27A25TYR00.0030.00532.453-0.120-0.1200.0000.0000.0000.000
28A26ILE00.0440.03726.0830.0770.0770.0000.0000.0000.000
29A27THR00.0550.03128.867-0.168-0.1680.0000.0000.0000.000
30A28ARG10.8950.91024.64512.01412.0140.0000.0000.0000.000
31A29ARG10.9790.99723.79112.18812.1880.0000.0000.0000.000
32A30ARG10.8970.91621.98412.66312.6630.0000.0000.0000.000
33A31ARG10.7920.86723.62511.83211.8320.0000.0000.0000.000
34A32ILE0-0.004-0.00620.143-0.458-0.4580.0000.0000.0000.000
35A33ASP-1-0.862-0.91819.522-15.702-15.7020.0000.0000.0000.000
36A34ILE0-0.0060.00818.750-0.888-0.8880.0000.0000.0000.000
37A35ALA0-0.027-0.02518.811-0.660-0.6600.0000.0000.0000.000
38A36ASN0-0.051-0.00913.846-2.054-2.0540.0000.0000.0000.000
39A37ALA00.0550.03414.456-1.368-1.3680.0000.0000.0000.000
40A38LEU0-0.0170.00215.115-0.772-0.7720.0000.0000.0000.000
41A39SER0-0.076-0.03913.208-1.387-1.3870.0000.0000.0000.000
42A40LEU00.0000.02015.4670.2640.2640.0000.0000.0000.000
43A41SER00.015-0.00518.2900.7500.7500.0000.0000.0000.000
44A42GLU-1-0.672-0.80919.738-12.230-12.2300.0000.0000.0000.000
45A43ARG10.8980.96922.82113.26813.2680.0000.0000.0000.000
46A44GLN0-0.012-0.02821.6560.7830.7830.0000.0000.0000.000
47A45ILE00.0710.04521.1490.7130.7130.0000.0000.0000.000
48A46LYS10.9150.97224.98910.48110.4810.0000.0000.0000.000
49A47ILE00.0080.00127.3140.4150.4150.0000.0000.0000.000
50A48TRP00.0320.02525.8950.5710.5710.0000.0000.0000.000
51A49PHE00.019-0.01126.7850.3730.3730.0000.0000.0000.000
52A50GLN0-0.031-0.02130.5930.1340.1340.0000.0000.0000.000
53A51ASN0-0.019-0.01931.0900.4390.4390.0000.0000.0000.000
54A52ARG10.7780.87530.64510.22310.2230.0000.0000.0000.000
55A53ARG10.8260.90133.6159.3429.3420.0000.0000.0000.000
56A54MET00.0880.08236.9520.2170.2170.0000.0000.0000.000
57A55LYS10.8390.91432.6369.4359.4350.0000.0000.0000.000
58A56SER0-0.020-0.01736.600-0.033-0.0330.0000.0000.0000.000
59A57LYS10.8770.92537.9727.7907.7900.0000.0000.0000.000
60A58LYS10.8240.90333.7569.3129.3120.0000.0000.0000.000
61A59ASP-1-0.834-0.93138.241-7.890-7.8900.0000.0000.0000.000
62A60ARG10.9140.95740.8427.4707.4700.0000.0000.0000.000
63A61THR0-0.033-0.01344.4370.0820.0820.0000.0000.0000.000
64A62LEU00.0280.01146.3420.0800.0800.0000.0000.0000.000
65A63ASP-1-0.884-0.92949.626-5.843-5.8430.0000.0000.0000.000
66A64SER0-0.032-0.00848.8660.0240.0240.0000.0000.0000.000
67A65SER0-0.033-0.01449.516-0.055-0.0550.0000.0000.0000.000
68A66PRO0-0.033-0.02746.354-0.172-0.1720.0000.0000.0000.000
69A67GLU-1-0.881-0.94645.397-6.894-6.8940.0000.0000.0000.000
70A68HIS00.0500.04942.031-0.633-0.6330.0000.0000.0000.000