FMODB

FMODB: The database of quantum mechanical data based on the FMO method

Last updated: 2025-04-23

All entries: 37539

Number of unique PDB entries: 7791

tag_button

FMODB ID: 22KNR

Calculation Name: 4HWI-B-Xray322

Preferred Name:

Target Type:

Ligand Name:

ligand 3-letter code:

PDB ID: 4HWI

Chain ID: B

ChEMBL ID:

UniProt ID: Q0WUQ1

Base Structure: X-ray

Registration Date: 2021-09-07

Reference: C. Watanabe, S. Koyama, K. Kamisaka, D. Takaya, T. Honma et. al., Interaction energy analysis of Apo structure dataset on FMODB, To be pubulished.

DOI:

Apendix: None


IFIE MAP

IFIE Diagram


Modeling method
Optimization MOE:Amber10:EHT
Restraint OptH
Protonation MOE:Protonate 3D
Complement MOE:Structure Preparation
Water No
Procedure Auto-FMO protocol ver. 1.20200129
FMO calculation
FMO method FMO2-MP2/6-31G(d)
Fragmentation Auto
Number of fragment 178
LigandResidueName
LigandFragmentNumber 0
LigandCharge
Software ABINIT-MP - Open Ver.1 Rev. 15 / 20190524
Total energy (hartree)
FMO2-HF: Electronic energy -1576255.306449
FMO2-HF: Nuclear repulsion 1505416.538546
FMO2-HF: Total energy -70838.767903
FMO2-MP2: Total energy -71043.570837


3D Structure
Snapshot
 
Ligand structure

ligand structure
Ligand Interaction
ligand interaction
Ligand binding energy
IFIE [kcal/mol] PIEDA [kcal/mol] Charge transfer value [e]
IFIE SUMIFIE SUM at MP2 level. ESElectro static interaction energy. EXExchange-repulsion energy. CT+mixCharge transfer and mixing terms energy. DI(MP2)Dispersion energy. q(I=>J)Charge transfer value from I to J fragments.
N/AN/AN/AN/AN/AN/A


Interactive mode: IFIE and PIEDA for fragment #1(B:65:ACE )


Summations of interaction energy for fragment #1(B:65:ACE )
IFIE [kcal/mol] PIEDA [kcal/mol] Charge transfer value [e]
IFIE SUMIFIE SUM at MP2 level. ESElectro static interaction energy. EXExchange-repulsion energy. CT+mixCharge transfer and mixing terms energy. DI(MP2)Dispersion energy. q(I=>J)Charge transfer value from I to J fragments.
1.8923.036-0.003-0.535-0.604-0.001
Interaction energy analysis for fragmet #1(B:65:ACE )
Snapshot

IFIE Diagram

Base fragment(s) of PIEDA/IFIE
Single fragment Multi fragments
Fragment list
Charge [e] FCHARGE : 0 / q_Mulliken : 0.041 / q_NPA : 0.013
Distance from base fragment(s) [Å]
Dist
Interaction energy by IFIE and PIEDA
[kcal/mol]
| Total | > | ES | > | EX | >
| CT+mix | > | DI(MP2) | >
Fragment charge [e]
FCHARGE q_Mulliken
q_NPA q(I=>J)
Residue
Res #    RES   
Sort
Graph Options
X Axis Label
Y Axis Max Y Axis Min
Display   
frag_NumFragment number. ChainChain species. Res #Residue number. RES3-letter code of amino acid residue, ligand and solvent molecule. FCHARGEFormal charge [e]. q_MullikenFragment charge evaluated by Mulliken charge [e]. q_NPAFragment charge evaluated by natural population analysis(NPA) charge [e]. DISTDistance from Ligand [Å]. TotalIFIE at MP2 level [kcal/mol]. ESElectro static interaction energy by PIEDA [kcal/mol]. EXExchange-repulsion energy by PIEDA [kcal/mol]. CT+mixCharge transfer and mixing terms energy by PIEDA [kcal/mol]. DI(MP2)Dispersion energy by PIEDA [kcal/mol]. q(I=>J)Charge transfer value from I to J fragmens [e].
3B67ILE 0-0.0100.0113.8241.0601.928-0.007-0.468-0.393-0.001
4B68ARG 10.8990.9627.2080.2790.2790.0000.0000.0000.000
5B69VAL 00.0090.01410.8920.1150.1150.0000.0000.0000.000
6B70ARG 10.8660.92513.4440.2220.2220.0000.0000.0000.000
7B71ILE 00.0310.01116.1830.0270.0270.0000.0000.0000.000
8B72LYS 10.9170.97519.5710.1110.1110.0000.0000.0000.000
9B73TYR 00.0440.01223.255-0.001-0.0010.0000.0000.0000.000
10B74GLY 00.0640.03825.5970.0040.0040.0000.0000.0000.000
11B75ALA 0-0.026-0.03028.3540.0000.0000.0000.0000.0000.000
12B76VAL 00.0200.02424.2190.0010.0010.0000.0000.0000.000
13B77TYR 0-0.027-0.02421.268-0.004-0.0040.0000.0000.0000.000
14B78HIS 00.0640.03119.405-0.007-0.0070.0000.0000.0000.000
15B79GLU -1-0.872-0.94114.080-0.320-0.3200.0000.0000.0000.000
16B80ILE 00.0010.00312.349-0.004-0.0040.0000.0000.0000.000
17B81ASN 00.003-0.0048.832-0.010-0.0100.0000.0000.0000.000
18B82ILE 00.028-0.0028.330-0.005-0.0050.0000.0000.0000.000
19B83SER 00.0300.0334.655-0.330-0.2540.000-0.026-0.0490.000
20B84PRO 00.006-0.0153.8340.3380.5380.004-0.041-0.1620.000
21B85GLN 00.0360.0035.3630.2000.2000.0000.0000.0000.000
22B86ALA 00.0080.0328.4350.1040.1040.0000.0000.0000.000
23B87SER 00.0100.00310.6410.0890.0890.0000.0000.0000.000
24B88PHE 00.014-0.03014.169-0.049-0.0490.0000.0000.0000.000
25B89GLY 00.006-0.00616.381-0.001-0.0010.0000.0000.0000.000
26B90GLU -1-0.880-0.93411.965-0.488-0.4880.0000.0000.0000.000
27B91LEU 00.0170.01113.347-0.018-0.0180.0000.0000.0000.000
28B92LYS 10.8510.92715.0230.1900.1900.0000.0000.0000.000
29B93LYS 10.9210.96017.2000.2270.2270.0000.0000.0000.000
30B94MET 0-0.027-0.00411.839-0.012-0.0120.0000.0000.0000.000
31B95LEU 00.0080.00716.4930.0090.0090.0000.0000.0000.000
32B96THR 0-0.0360.00019.1450.0200.0200.0000.0000.0000.000
33B97GLY 0-0.0180.00620.5770.0180.0180.0000.0000.0000.000
34B98PRO 0-0.003-0.00418.9620.0180.0180.0000.0000.0000.000
35B99THR 0-0.080-0.05121.9830.0190.0190.0000.0000.0000.000
36B100GLY 00.0350.02624.4920.0150.0150.0000.0000.0000.000
37B101ILE 00.0020.01625.0790.0070.0070.0000.0000.0000.000
38B102HIS 00.1380.06024.424-0.020-0.0200.0000.0000.0000.000
39B103HIS 00.0310.00121.4380.0020.0020.0000.0000.0000.000
40B104GLN 0-0.120-0.07423.299-0.004-0.0040.0000.0000.0000.000
41B105ASP -1-0.774-0.84726.133-0.099-0.0990.0000.0000.0000.000
42B106GLN 0-0.058-0.02921.308-0.009-0.0090.0000.0000.0000.000
43B107LYS 10.9190.96724.5000.0870.0870.0000.0000.0000.000
44B108LEU 00.042-0.00218.133-0.002-0.0020.0000.0000.0000.000
45B109MET 0-0.0340.00022.3540.0090.0090.0000.0000.0000.000
46B110TYR 00.013-0.01216.491-0.009-0.0090.0000.0000.0000.000
47B111LYS 10.9440.96619.8710.0800.0800.0000.0000.0000.000
48B112ASP -1-0.870-0.92222.605-0.068-0.0680.0000.0000.0000.000
49B113LYS 10.9410.97223.1160.0870.0870.0000.0000.0000.000
50B114GLU -1-0.871-0.95523.176-0.112-0.1120.0000.0000.0000.000
51B115ARG 10.8170.92219.1590.1290.1290.0000.0000.0000.000
52B116ASP -1-0.813-0.90221.610-0.124-0.1240.0000.0000.0000.000
53B117SER 00.025-0.01319.687-0.016-0.0160.0000.0000.0000.000
54B118LYS 10.9140.95018.5500.0740.0740.0000.0000.0000.000
55B119ALA 0-0.0240.01818.1840.0040.0040.0000.0000.0000.000
56B120PHE 00.0730.02412.758-0.023-0.0230.0000.0000.0000.000
57B121LEU 0-0.016-0.00510.4240.0510.0510.0000.0000.0000.000
58B122ASP -1-0.784-0.8858.950-0.069-0.0690.0000.0000.0000.000
59B123VAL 0-0.023-0.01011.0650.0510.0510.0000.0000.0000.000
60B124SER 0-0.103-0.06014.4080.0280.0280.0000.0000.0000.000
61B125GLY 0-0.047-0.02214.4500.0070.0070.0000.0000.0000.000
62B126VAL 0-0.065-0.01811.4380.0120.0120.0000.0000.0000.000
63B127LYS 10.9840.98110.438-0.013-0.0130.0000.0000.0000.000
64B128ASP -1-0.689-0.8718.970-0.400-0.4000.0000.0000.0000.000
65B129LYS 10.7660.88210.5980.2160.2160.0000.0000.0000.000
66B130SER 0-0.0270.01113.4270.0560.0560.0000.0000.0000.000
67B131LYS 10.9770.98815.3830.0850.0850.0000.0000.0000.000
68B132MET 0-0.034-0.00817.037-0.002-0.0020.0000.0000.0000.000
69B133VAL 0-0.027-0.00819.9800.0050.0050.0000.0000.0000.000
70B134LEU 0-0.0070.01122.218-0.005-0.0050.0000.0000.0000.000
71B135ILE 0-0.045-0.02824.0480.0110.0110.0000.0000.0000.000
72B136GLU -1-0.910-0.95127.100-0.109-0.1090.0000.0000.0000.000
73B137ASP -1-0.905-0.96529.029-0.077-0.0770.0000.0000.0000.000
74B138PRO 00.0520.03031.178-0.002-0.0020.0000.0000.0000.000
75B139LEU 0-0.024-0.01533.7980.0040.0040.0000.0000.0000.000
76B140SER 0-0.027-0.03429.6790.0040.0040.0000.0000.0000.000
77B141GLN 00.004-0.00531.728-0.002-0.0020.0000.0000.0000.000
78B142GLU -1-0.853-0.93633.469-0.055-0.0550.0000.0000.0000.000
79B143LYS 10.9440.98227.8800.1020.1020.0000.0000.0000.000
80B144ARG 10.9460.97028.9480.0840.0840.0000.0000.0000.000
81B145PHE 0-0.003-0.02831.4160.0030.0030.0000.0000.0000.000
82B146LEU 0-0.043-0.02034.6220.0040.0040.0000.0000.0000.000
83B147GLU -1-0.937-0.98429.371-0.064-0.0640.0000.0000.0000.000
84B148MET 0-0.0210.00330.9520.0010.0010.0000.0000.0000.000
85B149ARG 10.9691.00832.7840.0520.0520.0000.0000.0000.000
86B150LYS 10.9360.96933.4430.0570.0570.0000.0000.0000.000
87B151ILE 00.0300.02128.4590.0030.0030.0000.0000.0000.000
88B152ALA 00.0200.01032.6490.0030.0030.0000.0000.0000.000
89B153LYS 10.9190.96135.4900.0370.0370.0000.0000.0000.000
90B154THR 00.000-0.00632.9840.0030.0030.0000.0000.0000.000
91B155GLU -1-0.878-0.94432.599-0.030-0.0300.0000.0000.0000.000
92B156LYS 10.9160.96735.3080.0280.0280.0000.0000.0000.000
93B157ALA 00.0090.00438.9630.0020.0020.0000.0000.0000.000
94B158SER 00.0350.01434.8210.0030.0030.0000.0000.0000.000
95B159LYS 10.9410.94837.5660.0220.0220.0000.0000.0000.000
96B160ALA 0-0.029-0.00938.9150.0020.0020.0000.0000.0000.000
97B161ILE 0-0.007-0.00240.0350.0020.0020.0000.0000.0000.000
98B162SER 0-0.021-0.01137.9970.0020.0020.0000.0000.0000.000
99B163ASP -1-0.853-0.91940.684-0.014-0.0140.0000.0000.0000.000
100B164ILE 0-0.0090.00043.5720.0010.0010.0000.0000.0000.000
101B165SER 0-0.017-0.00442.1240.0020.0020.0000.0000.0000.000
102B166LEU 0-0.015-0.00441.2580.0010.0010.0000.0000.0000.000
103B167GLU -1-0.808-0.86844.921-0.005-0.0050.0000.0000.0000.000
104B168VAL 0-0.026-0.03046.9160.0010.0010.0000.0000.0000.000
105B169ASP -1-0.856-0.90644.0460.0000.0000.0000.0000.0000.000
106B170ARG 10.7970.88947.5330.0050.0050.0000.0000.0000.000
107B171LEU 0-0.030-0.02050.4140.0010.0010.0000.0000.0000.000
108B172GLY 00.0700.02650.7750.0010.0010.0000.0000.0000.000
109B173GLY 0-0.023-0.01151.2720.0010.0010.0000.0000.0000.000
110B174ARG 10.9320.95452.2990.0020.0020.0000.0000.0000.000
111B175VAL 00.0160.02654.4440.0000.0000.0000.0000.0000.000
112B176SER 00.0360.01452.5710.0010.0010.0000.0000.0000.000
113B177ALA 0-0.042-0.02054.9590.0010.0010.0000.0000.0000.000
114B178PHE 00.017-0.02557.3290.0000.0000.0000.0000.0000.000
115B179GLU -1-0.882-0.94055.6920.0050.0050.0000.0000.0000.000
116B180MET 0-0.069-0.03057.5630.0000.0000.0000.0000.0000.000
117B181VAL 00.023-0.00559.4200.0000.0000.0000.0000.0000.000
118B182THR 0-0.0030.01362.5550.0000.0000.0000.0000.0000.000
119B183LYS 10.9240.96458.124-0.008-0.0080.0000.0000.0000.000
120B184LYS 10.8420.91859.899-0.006-0.0060.0000.0000.0000.000
121B185GLY 00.0250.02464.5020.0000.0000.0000.0000.0000.000
122B186GLY 0-0.0150.00566.3970.0000.0000.0000.0000.0000.000
123B187LYS 10.9660.97167.639-0.002-0.0020.0000.0000.0000.000
124B188ILE 00.0040.02462.7250.0000.0000.0000.0000.0000.000
125B189ALA 0-0.026-0.00766.5790.0000.0000.0000.0000.0000.000
126B190GLU -1-0.814-0.92766.816-0.001-0.0010.0000.0000.0000.000
127B191LYS 10.9900.99066.8470.0010.0010.0000.0000.0000.000
128B192ASP -1-0.919-0.95363.643-0.001-0.0010.0000.0000.0000.000
129B193LEU 0-0.028-0.01462.3450.0000.0000.0000.0000.0000.000
130B194VAL 00.0230.01662.0420.0000.0000.0000.0000.0000.000
131B195THR 00.001-0.01061.1680.0000.0000.0000.0000.0000.000
132B196VAL 0-0.062-0.03256.870-0.001-0.0010.0000.0000.0000.000
133B197ILE 00.0580.03657.7070.0000.0000.0000.0000.0000.000
134B198GLU -1-0.901-0.95458.335-0.004-0.0040.0000.0000.0000.000
135B199LEU 0-0.080-0.04156.273-0.001-0.0010.0000.0000.0000.000
136B200LEU 00.011-0.00452.669-0.001-0.0010.0000.0000.0000.000
137B201MET 00.0110.01053.9260.0000.0000.0000.0000.0000.000
138B202ASN 0-0.011-0.01055.154-0.001-0.0010.0000.0000.0000.000
139B203GLU -1-0.820-0.91350.059-0.009-0.0090.0000.0000.0000.000
140B204LEU 0-0.019-0.01150.311-0.001-0.0010.0000.0000.0000.000
141B205ILE 00.0450.02151.148-0.001-0.0010.0000.0000.0000.000
142B206LYS 10.8130.90049.3600.0090.0090.0000.0000.0000.000
143B207LEU 0-0.028-0.01545.303-0.001-0.0010.0000.0000.0000.000
144B208ASP -1-0.931-0.95947.147-0.010-0.0100.0000.0000.0000.000
145B209ALA 0-0.047-0.01349.388-0.001-0.0010.0000.0000.0000.000
146B210ILE 0-0.069-0.02142.682-0.002-0.0020.0000.0000.0000.000
147B211VAL 0-0.032-0.02042.3750.0010.0010.0000.0000.0000.000
148B212ALA 0-0.003-0.01239.975-0.001-0.0010.0000.0000.0000.000
149B213GLU -1-0.940-0.97236.300-0.027-0.0270.0000.0000.0000.000
150B214GLY 00.011-0.00434.962-0.001-0.0010.0000.0000.0000.000
151B215ASP -1-0.831-0.92531.059-0.014-0.0140.0000.0000.0000.000
152B216VAL 00.0410.02534.6820.0020.0020.0000.0000.0000.000
153B217LYS 10.9240.96637.1220.0150.0150.0000.0000.0000.000
154B218LEU 0-0.041-0.01935.2530.0020.0020.0000.0000.0000.000
155B219GLN 00.0670.00336.1010.0010.0010.0000.0000.0000.000
156B220ARG 10.9190.97839.2930.0150.0150.0000.0000.0000.000
157B221LYS 10.9130.93842.0810.0080.0080.0000.0000.0000.000
158B222MET 0-0.0150.02238.1260.0010.0010.0000.0000.0000.000
159B223GLN 00.0650.02541.6390.0010.0010.0000.0000.0000.000
160B224VAL 00.0170.02344.9900.0000.0000.0000.0000.0000.000
161B225LYS 10.9380.97346.2800.0010.0010.0000.0000.0000.000
162B226ARG 10.7960.89344.3790.0020.0020.0000.0000.0000.000
163B227VAL 00.0190.01047.9040.0010.0010.0000.0000.0000.000
164B228GLN 0-0.006-0.02750.8780.0010.0010.0000.0000.0000.000
165B229ASN 00.0340.02749.0120.0000.0000.0000.0000.0000.000
166B230TYR 0-0.010-0.00448.8880.0000.0000.0000.0000.0000.000
167B231VAL 00.0260.00953.8160.0000.0000.0000.0000.0000.000
168B232GLU -1-0.898-0.93055.1070.0020.0020.0000.0000.0000.000
169B233THR 0-0.042-0.01655.4270.0010.0010.0000.0000.0000.000
170B234LEU 0-0.063-0.03557.6560.0000.0000.0000.0000.0000.000
171B235ASP -1-0.876-0.93960.035-0.001-0.0010.0000.0000.0000.000
172B236ALA 0-0.031-0.01460.9510.0000.0000.0000.0000.0000.000
173B237LEU 0-0.070-0.04760.3840.0000.0000.0000.0000.0000.000
174B238LYS 10.9410.97063.7540.0010.0010.0000.0000.0000.000
175B239VAL 00.0080.01165.8980.0000.0000.0000.0000.0000.000
176B240LYS 10.8650.93764.567-0.004-0.0040.0000.0000.0000.000
177B241ASN 0-0.080-0.04866.9380.0000.0000.0000.0000.0000.000
178B242SER -1-0.943-0.94269.9900.0010.0010.0000.0000.0000.000