FMODB ID: 2MLYR
Calculation Name: 2D1Y-B-Xray547
Preferred Name:
Target Type:
Ligand Name: nicotinamide-adenine-dinucleotide
Ligand 3-letter code: NAD
Ligand of Interest (LOI):
Structure Source: PDB
PDB ID: 2D1Y
Chain ID: B
UniProt ID: Q5SLC4
Base Structure: X-ray
Registration Date: 2025-10-05
Reference: Sci Data 11, 1164 (2024).
DOI: https://doi.org/10.1038/s41597-024-03999-2
Apendix: None
Modeling method
| Optimization | MOE:Amber10:EHT |
|---|---|
| Restraint | OptAll |
| Protonation | MOE:Protonate 3D |
| Complement | MOE:Homology Modeling |
| Water | No |
| Procedure | Manual calculation |
| Remarks |
ac.sh, 23 2024 Oct; Missing atoms/residues were imported from a 100% homology model, which was constructed by MOE. |
FMO calculation
| FMO method | FMO2-MP2/6-31G(d) |
|---|---|
| Fragmentation | Auto |
| Number of fragment | 249 |
| LigandResidueName | |
| LigandFragmentNumber | 0 |
| LigandCharge | |
| Software | ABINIT-MP - Open Ver. 1 Rev. 23 (BINDS Ver. 1) / 20230922 |
Total energy (hartree)
| FMO2-HF: Electronic energy | -2934174.407888 |
|---|---|
| FMO2-HF: Nuclear repulsion | 2843106.493089 |
| FMO2-HF: Total energy | -91067.914799 |
| FMO2-MP2: Total energy | -91336.634864 |
3D Structure
Ligand structure
Ligand Interaction
Ligand binding energy
| IFIE [kcal/mol] | PIEDA [kcal/mol] | Charge transfer value [e] | |||
|---|---|---|---|---|---|
| IFIE SUMIFIE SUM at MP2 level. | ESElectro static interaction energy. | EXExchange-repulsion energy. | CT+mixCharge transfer and mixing terms energy. | DI(MP2)Dispersion energy. | q(I=>J)Charge transfer value from I to J fragments. |
| N/A | N/A | N/A | N/A | N/A | N/A |
Interactive mode: IFIE and PIEDA for fragment #1(A:2:GLY)
Summations of interaction energy for
fragment #1(A:2:GLY)
| IFIE [kcal/mol] | PIEDA [kcal/mol] | Charge transfer value [e] | |||
|---|---|---|---|---|---|
| IFIE SUMIFIE SUM at MP2 level. | ESElectro static interaction energy. | EXExchange-repulsion energy. | CT+mixCharge transfer and mixing terms energy. | DI(MP2)Dispersion energy. | q(I=>J)Charge transfer value from I to J fragments. |
| -137.864 | -131.799 | 14.775 | -11.477 | -9.361 | -0.136 |
Interaction energy analysis for fragmet #1(A:2:GLY)
| frag_NumFragment number. | ChainChain species. | Res #Residue number. | RES3-letter code of amino acid residue, ligand and solvent molecule. | FCHARGEFormal charge [e]. | q_MullikenFragment charge evaluated by Mulliken charge [e]. | q_NPAFragment charge evaluated by natural population analysis(NPA) charge [e]. | DISTDistance from Ligand [Å]. | TotalIFIE at MP2 level [kcal/mol]. | ESElectro static interaction energy by PIEDA [kcal/mol]. | EXExchange-repulsion energy by PIEDA [kcal/mol]. | CT+mixCharge transfer and mixing terms energy by PIEDA [kcal/mol]. | DI(MP2)Dispersion energy by PIEDA [kcal/mol]. | q(I=>J)Charge transfer value from I to J fragmens [e]. |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3 | A | 4 | PHE | 0 | 0.001 | -0.003 | 3.383 | 11.701 | 13.000 | -0.003 | -0.593 | -0.704 | -0.002 |
| 4 | A | 5 | ALA | 0 | -0.003 | 0.009 | 2.008 | 2.706 | 2.861 | 2.064 | -0.995 | -1.224 | -0.007 |
| 5 | A | 6 | GLY | 0 | 0.007 | 0.010 | 3.710 | 8.247 | 8.473 | 0.012 | -0.083 | -0.154 | -0.001 |
| 28 | A | 29 | GLU | -1 | -0.838 | -0.915 | 2.380 | -86.255 | -82.778 | 2.704 | -3.242 | -2.939 | -0.032 |
| 29 | A | 30 | GLY | 0 | -0.012 | -0.008 | 1.832 | -48.661 | -47.803 | 9.996 | -6.561 | -4.292 | -0.094 |
| 30 | A | 31 | ALA | 0 | -0.011 | 0.000 | 3.540 | 4.526 | 4.576 | 0.002 | -0.003 | -0.048 | 0.000 |
| 6 | A | 7 | LYS | 1 | 0.836 | 0.930 | 6.713 | 40.565 | 40.565 | 0.000 | 0.000 | 0.000 | 0.000 |
| 7 | A | 8 | GLY | 0 | 0.044 | 0.035 | 8.698 | -1.328 | -1.328 | 0.000 | 0.000 | 0.000 | 0.000 |
| 8 | A | 9 | VAL | 0 | -0.040 | -0.029 | 9.121 | 0.586 | 0.586 | 0.000 | 0.000 | 0.000 | 0.000 |
| 9 | A | 10 | LEU | 0 | 0.034 | 0.026 | 12.166 | 0.723 | 0.723 | 0.000 | 0.000 | 0.000 | 0.000 |
| 10 | A | 11 | VAL | 0 | -0.005 | -0.009 | 13.918 | -0.211 | -0.211 | 0.000 | 0.000 | 0.000 | 0.000 |
| 11 | A | 12 | THR | 0 | 0.066 | 0.033 | 16.765 | 0.572 | 0.572 | 0.000 | 0.000 | 0.000 | 0.000 |
| 12 | A | 13 | GLY | 0 | 0.002 | 0.006 | 20.553 | -0.132 | -0.132 | 0.000 | 0.000 | 0.000 | 0.000 |
| 13 | A | 14 | GLY | 0 | 0.006 | -0.005 | 18.981 | -0.218 | -0.218 | 0.000 | 0.000 | 0.000 | 0.000 |
| 14 | A | 15 | ALA | 0 | 0.036 | 0.018 | 19.382 | -0.497 | -0.497 | 0.000 | 0.000 | 0.000 | 0.000 |
| 15 | A | 16 | ARG | 1 | 0.941 | 0.955 | 21.915 | 11.579 | 11.579 | 0.000 | 0.000 | 0.000 | 0.000 |
| 16 | A | 17 | GLY | 0 | -0.008 | -0.005 | 21.544 | -0.115 | -0.115 | 0.000 | 0.000 | 0.000 | 0.000 |
| 17 | A | 18 | ILE | 0 | 0.051 | 0.017 | 18.087 | -0.727 | -0.727 | 0.000 | 0.000 | 0.000 | 0.000 |
| 18 | A | 19 | GLY | 0 | 0.051 | 0.029 | 17.029 | -1.101 | -1.101 | 0.000 | 0.000 | 0.000 | 0.000 |
| 19 | A | 20 | ARG | 1 | 0.847 | 0.939 | 16.464 | 13.584 | 13.584 | 0.000 | 0.000 | 0.000 | 0.000 |
| 20 | A | 21 | ALA | 0 | 0.041 | 0.019 | 14.836 | -1.252 | -1.252 | 0.000 | 0.000 | 0.000 | 0.000 |
| 21 | A | 22 | ILE | 0 | -0.009 | -0.014 | 12.724 | -2.062 | -2.062 | 0.000 | 0.000 | 0.000 | 0.000 |
| 22 | A | 23 | ALA | 0 | 0.016 | 0.014 | 11.502 | -2.503 | -2.503 | 0.000 | 0.000 | 0.000 | 0.000 |
| 23 | A | 24 | GLN | 0 | 0.026 | 0.007 | 11.039 | -1.971 | -1.971 | 0.000 | 0.000 | 0.000 | 0.000 |
| 24 | A | 25 | ALA | 0 | -0.007 | 0.005 | 8.792 | -2.861 | -2.861 | 0.000 | 0.000 | 0.000 | 0.000 |
| 25 | A | 26 | PHE | 0 | 0.020 | -0.015 | 6.887 | -5.292 | -5.292 | 0.000 | 0.000 | 0.000 | 0.000 |
| 26 | A | 27 | ALA | 0 | 0.023 | 0.022 | 6.104 | -6.845 | -6.845 | 0.000 | 0.000 | 0.000 | 0.000 |
| 27 | A | 28 | ARG | 1 | 0.757 | 0.856 | 5.686 | 32.342 | 32.342 | 0.000 | 0.000 | 0.000 | 0.000 |
| 31 | A | 32 | LEU | 0 | 0.004 | 0.009 | 6.409 | 2.028 | 2.028 | 0.000 | 0.000 | 0.000 | 0.000 |
| 32 | A | 33 | VAL | 0 | -0.002 | -0.002 | 9.279 | 1.446 | 1.446 | 0.000 | 0.000 | 0.000 | 0.000 |
| 33 | A | 34 | ALA | 0 | 0.015 | 0.016 | 11.712 | 1.289 | 1.289 | 0.000 | 0.000 | 0.000 | 0.000 |
| 34 | A | 35 | LEU | 0 | -0.039 | -0.015 | 15.490 | -0.166 | -0.166 | 0.000 | 0.000 | 0.000 | 0.000 |
| 35 | A | 36 | CYS | 0 | -0.023 | -0.002 | 17.619 | 0.606 | 0.606 | 0.000 | 0.000 | 0.000 | 0.000 |
| 36 | A | 37 | ASP | -1 | -0.795 | -0.924 | 21.381 | -13.232 | -13.232 | 0.000 | 0.000 | 0.000 | 0.000 |
| 37 | A | 38 | LEU | 0 | 0.038 | 0.049 | 24.256 | 0.129 | 0.129 | 0.000 | 0.000 | 0.000 | 0.000 |
| 38 | A | 39 | ARG | 1 | 0.845 | 0.934 | 25.865 | 11.476 | 11.476 | 0.000 | 0.000 | 0.000 | 0.000 |
| 39 | A | 40 | PRO | 0 | 0.038 | 0.021 | 25.644 | -0.510 | -0.510 | 0.000 | 0.000 | 0.000 | 0.000 |
| 40 | A | 41 | GLU | -1 | -0.788 | -0.904 | 25.437 | -11.819 | -11.819 | 0.000 | 0.000 | 0.000 | 0.000 |
| 41 | A | 42 | GLY | 0 | -0.013 | -0.028 | 21.715 | -0.611 | -0.611 | 0.000 | 0.000 | 0.000 | 0.000 |
| 42 | A | 43 | LYS | 1 | 0.816 | 0.903 | 20.552 | 13.274 | 13.274 | 0.000 | 0.000 | 0.000 | 0.000 |
| 43 | A | 44 | GLU | -1 | -0.861 | -0.935 | 20.659 | -13.256 | -13.256 | 0.000 | 0.000 | 0.000 | 0.000 |
| 44 | A | 45 | VAL | 0 | -0.067 | -0.029 | 16.749 | -0.792 | -0.792 | 0.000 | 0.000 | 0.000 | 0.000 |
| 45 | A | 46 | ALA | 0 | -0.010 | -0.002 | 16.094 | -1.222 | -1.222 | 0.000 | 0.000 | 0.000 | 0.000 |
| 46 | A | 47 | GLU | -1 | -0.850 | -0.919 | 15.912 | -15.171 | -15.171 | 0.000 | 0.000 | 0.000 | 0.000 |
| 47 | A | 48 | ALA | 0 | -0.037 | -0.017 | 16.905 | -0.591 | -0.591 | 0.000 | 0.000 | 0.000 | 0.000 |
| 48 | A | 49 | ILE | 0 | -0.080 | -0.044 | 11.656 | -1.129 | -1.129 | 0.000 | 0.000 | 0.000 | 0.000 |
| 49 | A | 50 | GLY | 0 | -0.022 | 0.005 | 11.726 | -2.100 | -2.100 | 0.000 | 0.000 | 0.000 | 0.000 |
| 50 | A | 51 | GLY | 0 | -0.015 | 0.004 | 13.393 | -0.843 | -0.843 | 0.000 | 0.000 | 0.000 | 0.000 |
| 51 | A | 52 | ALA | 0 | -0.023 | -0.017 | 14.041 | 1.428 | 1.428 | 0.000 | 0.000 | 0.000 | 0.000 |
| 52 | A | 53 | PHE | 0 | -0.019 | -0.027 | 17.112 | -0.421 | -0.421 | 0.000 | 0.000 | 0.000 | 0.000 |
| 53 | A | 54 | PHE | 0 | -0.004 | 0.001 | 18.929 | 0.331 | 0.331 | 0.000 | 0.000 | 0.000 | 0.000 |
| 54 | A | 55 | GLN | 0 | -0.039 | -0.030 | 22.889 | -0.096 | -0.096 | 0.000 | 0.000 | 0.000 | 0.000 |
| 55 | A | 56 | VAL | 0 | -0.018 | -0.022 | 24.471 | 0.181 | 0.181 | 0.000 | 0.000 | 0.000 | 0.000 |
| 56 | A | 57 | ASP | -1 | -0.860 | -0.929 | 27.174 | -10.146 | -10.146 | 0.000 | 0.000 | 0.000 | 0.000 |
| 57 | A | 58 | LEU | 0 | -0.024 | -0.026 | 24.382 | -0.131 | -0.131 | 0.000 | 0.000 | 0.000 | 0.000 |
| 58 | A | 59 | GLU | -1 | -0.881 | -0.941 | 28.788 | -8.894 | -8.894 | 0.000 | 0.000 | 0.000 | 0.000 |
| 59 | A | 60 | ASP | -1 | -0.830 | -0.902 | 31.911 | -9.282 | -9.282 | 0.000 | 0.000 | 0.000 | 0.000 |
| 60 | A | 61 | GLU | -1 | -0.935 | -0.978 | 30.941 | -9.470 | -9.470 | 0.000 | 0.000 | 0.000 | 0.000 |
| 61 | A | 62 | ARG | 1 | 0.920 | 0.944 | 30.992 | 8.879 | 8.879 | 0.000 | 0.000 | 0.000 | 0.000 |
| 62 | A | 63 | GLU | -1 | -0.881 | -0.939 | 28.971 | -10.679 | -10.679 | 0.000 | 0.000 | 0.000 | 0.000 |
| 63 | A | 64 | ARG | 1 | 0.772 | 0.857 | 26.569 | 9.987 | 9.987 | 0.000 | 0.000 | 0.000 | 0.000 |
| 64 | A | 65 | VAL | 0 | -0.041 | -0.023 | 25.928 | -0.482 | -0.482 | 0.000 | 0.000 | 0.000 | 0.000 |
| 65 | A | 66 | ARG | 1 | 0.956 | 0.993 | 26.203 | 10.048 | 10.048 | 0.000 | 0.000 | 0.000 | 0.000 |
| 66 | A | 67 | PHE | 0 | 0.049 | 0.020 | 18.926 | -0.416 | -0.416 | 0.000 | 0.000 | 0.000 | 0.000 |
| 67 | A | 68 | VAL | 0 | -0.014 | -0.011 | 20.982 | -0.717 | -0.717 | 0.000 | 0.000 | 0.000 | 0.000 |
| 68 | A | 69 | GLU | -1 | -0.947 | -0.971 | 21.726 | -11.782 | -11.782 | 0.000 | 0.000 | 0.000 | 0.000 |
| 69 | A | 70 | GLU | -1 | -0.912 | -0.975 | 22.898 | -12.385 | -12.385 | 0.000 | 0.000 | 0.000 | 0.000 |
| 70 | A | 71 | ALA | 0 | 0.002 | 0.002 | 18.158 | -0.526 | -0.526 | 0.000 | 0.000 | 0.000 | 0.000 |
| 71 | A | 72 | ALA | 0 | -0.016 | -0.009 | 18.038 | -1.020 | -1.020 | 0.000 | 0.000 | 0.000 | 0.000 |
| 72 | A | 73 | TYR | 0 | -0.070 | -0.029 | 18.871 | -0.384 | -0.384 | 0.000 | 0.000 | 0.000 | 0.000 |
| 73 | A | 74 | ALA | 0 | -0.037 | -0.021 | 18.788 | -0.344 | -0.344 | 0.000 | 0.000 | 0.000 | 0.000 |
| 74 | A | 75 | LEU | 0 | -0.050 | -0.020 | 13.133 | -0.877 | -0.877 | 0.000 | 0.000 | 0.000 | 0.000 |
| 75 | A | 76 | GLY | 0 | -0.025 | 0.004 | 14.548 | -1.264 | -1.264 | 0.000 | 0.000 | 0.000 | 0.000 |
| 76 | A | 77 | ARG | 1 | 0.779 | 0.846 | 11.667 | 25.383 | 25.383 | 0.000 | 0.000 | 0.000 | 0.000 |
| 77 | A | 78 | VAL | 0 | 0.025 | 0.004 | 14.629 | -0.541 | -0.541 | 0.000 | 0.000 | 0.000 | 0.000 |
| 78 | A | 79 | ASP | -1 | -0.760 | -0.842 | 11.454 | -25.377 | -25.377 | 0.000 | 0.000 | 0.000 | 0.000 |
| 79 | A | 80 | VAL | 0 | -0.038 | -0.025 | 10.803 | 0.293 | 0.293 | 0.000 | 0.000 | 0.000 | 0.000 |
| 80 | A | 81 | LEU | 0 | 0.003 | 0.017 | 13.777 | 0.226 | 0.226 | 0.000 | 0.000 | 0.000 | 0.000 |
| 81 | A | 82 | VAL | 0 | -0.014 | -0.010 | 14.067 | 0.057 | 0.057 | 0.000 | 0.000 | 0.000 | 0.000 |
| 82 | A | 83 | ASN | 0 | -0.011 | -0.012 | 17.212 | 0.434 | 0.434 | 0.000 | 0.000 | 0.000 | 0.000 |
| 83 | A | 84 | ASN | 0 | -0.013 | -0.034 | 18.848 | 0.260 | 0.260 | 0.000 | 0.000 | 0.000 | 0.000 |
| 84 | A | 85 | ALA | 0 | -0.036 | -0.003 | 20.846 | 0.491 | 0.491 | 0.000 | 0.000 | 0.000 | 0.000 |
| 85 | A | 86 | ALA | 0 | -0.014 | -0.020 | 24.033 | 0.176 | 0.176 | 0.000 | 0.000 | 0.000 | 0.000 |
| 86 | A | 87 | ILE | 0 | -0.031 | 0.000 | 27.139 | 0.054 | 0.054 | 0.000 | 0.000 | 0.000 | 0.000 |
| 87 | A | 88 | ALA | 0 | 0.029 | 0.011 | 30.667 | -0.023 | -0.023 | 0.000 | 0.000 | 0.000 | 0.000 |
| 88 | A | 89 | ALA | 0 | 0.000 | -0.010 | 33.511 | 0.065 | 0.065 | 0.000 | 0.000 | 0.000 | 0.000 |
| 89 | A | 90 | PRO | 0 | -0.024 | -0.001 | 37.053 | 0.068 | 0.068 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90 | A | 91 | GLY | 0 | 0.060 | 0.027 | 39.405 | 0.166 | 0.166 | 0.000 | 0.000 | 0.000 | 0.000 |
| 91 | A | 92 | SER | 0 | 0.033 | 0.021 | 41.273 | -0.142 | -0.142 | 0.000 | 0.000 | 0.000 | 0.000 |
| 92 | A | 93 | ALA | 0 | 0.000 | -0.019 | 43.778 | 0.009 | 0.009 | 0.000 | 0.000 | 0.000 | 0.000 |
| 93 | A | 94 | LEU | 0 | -0.026 | -0.008 | 45.085 | 0.092 | 0.092 | 0.000 | 0.000 | 0.000 | 0.000 |
| 94 | A | 95 | THR | 0 | -0.020 | -0.008 | 45.588 | 0.055 | 0.055 | 0.000 | 0.000 | 0.000 | 0.000 |
| 95 | A | 96 | VAL | 0 | -0.016 | 0.014 | 40.479 | -0.024 | -0.024 | 0.000 | 0.000 | 0.000 | 0.000 |
| 96 | A | 97 | ARG | 1 | 0.873 | 0.893 | 42.048 | 7.599 | 7.599 | 0.000 | 0.000 | 0.000 | 0.000 |
| 97 | A | 98 | LEU | 0 | 0.042 | 0.003 | 42.941 | -0.195 | -0.195 | 0.000 | 0.000 | 0.000 | 0.000 |
| 98 | A | 99 | PRO | 0 | -0.023 | -0.027 | 42.424 | -0.155 | -0.155 | 0.000 | 0.000 | 0.000 | 0.000 |
| 99 | A | 100 | GLU | -1 | -0.779 | -0.842 | 39.278 | -7.941 | -7.941 | 0.000 | 0.000 | 0.000 | 0.000 |
| 100 | A | 101 | TRP | 0 | 0.047 | 0.021 | 38.009 | -0.271 | -0.271 | 0.000 | 0.000 | 0.000 | 0.000 |
| 101 | A | 102 | ARG | 1 | 0.938 | 0.963 | 37.784 | 7.216 | 7.216 | 0.000 | 0.000 | 0.000 | 0.000 |
| 102 | A | 103 | ARG | 1 | 0.938 | 0.977 | 34.816 | 8.410 | 8.410 | 0.000 | 0.000 | 0.000 | 0.000 |
| 103 | A | 104 | VAL | 0 | 0.003 | 0.002 | 33.159 | -0.297 | -0.297 | 0.000 | 0.000 | 0.000 | 0.000 |
| 104 | A | 105 | LEU | 0 | -0.018 | -0.011 | 32.713 | -0.333 | -0.333 | 0.000 | 0.000 | 0.000 | 0.000 |
| 105 | A | 106 | GLU | -1 | -0.806 | -0.876 | 32.744 | -9.891 | -9.891 | 0.000 | 0.000 | 0.000 | 0.000 |
| 106 | A | 107 | VAL | 0 | 0.012 | -0.005 | 28.767 | -0.334 | -0.334 | 0.000 | 0.000 | 0.000 | 0.000 |
| 107 | A | 108 | ASN | 0 | -0.021 | -0.026 | 28.272 | -0.712 | -0.712 | 0.000 | 0.000 | 0.000 | 0.000 |
| 108 | A | 109 | LEU | 0 | -0.038 | -0.018 | 28.414 | -0.291 | -0.291 | 0.000 | 0.000 | 0.000 | 0.000 |
| 109 | A | 110 | THR | 0 | -0.024 | -0.016 | 29.550 | -0.269 | -0.269 | 0.000 | 0.000 | 0.000 | 0.000 |
| 110 | A | 111 | ALA | 0 | 0.027 | 0.024 | 27.330 | -0.216 | -0.216 | 0.000 | 0.000 | 0.000 | 0.000 |
| 111 | A | 112 | PRO | 0 | -0.001 | 0.002 | 24.693 | -0.373 | -0.373 | 0.000 | 0.000 | 0.000 | 0.000 |
| 112 | A | 113 | MET | 0 | -0.010 | 0.031 | 25.133 | -0.478 | -0.478 | 0.000 | 0.000 | 0.000 | 0.000 |
| 113 | A | 114 | HIS | 0 | 0.022 | 0.018 | 27.040 | -0.284 | -0.284 | 0.000 | 0.000 | 0.000 | 0.000 |
| 114 | A | 115 | LEU | 0 | 0.025 | 0.005 | 22.719 | -0.146 | -0.146 | 0.000 | 0.000 | 0.000 | 0.000 |
| 115 | A | 116 | SER | 0 | -0.006 | -0.026 | 22.339 | -0.791 | -0.791 | 0.000 | 0.000 | 0.000 | 0.000 |
| 116 | A | 117 | ALA | 0 | -0.006 | -0.004 | 23.341 | -0.263 | -0.263 | 0.000 | 0.000 | 0.000 | 0.000 |
| 117 | A | 118 | LEU | 0 | -0.071 | -0.024 | 24.519 | 0.079 | 0.079 | 0.000 | 0.000 | 0.000 | 0.000 |
| 118 | A | 119 | ALA | 0 | 0.064 | 0.027 | 19.192 | -0.137 | -0.137 | 0.000 | 0.000 | 0.000 | 0.000 |
| 119 | A | 120 | ALA | 0 | 0.039 | 0.015 | 20.399 | -0.543 | -0.543 | 0.000 | 0.000 | 0.000 | 0.000 |
| 120 | A | 121 | ARG | 1 | 0.869 | 0.927 | 22.221 | 11.500 | 11.500 | 0.000 | 0.000 | 0.000 | 0.000 |
| 121 | A | 122 | GLU | -1 | -0.801 | -0.881 | 19.388 | -14.110 | -14.110 | 0.000 | 0.000 | 0.000 | 0.000 |
| 122 | A | 123 | MET | 0 | 0.008 | 0.019 | 16.197 | -0.041 | -0.041 | 0.000 | 0.000 | 0.000 | 0.000 |
| 123 | A | 124 | ARG | 1 | 0.927 | 0.966 | 18.670 | 12.511 | 12.511 | 0.000 | 0.000 | 0.000 | 0.000 |
| 124 | A | 125 | LYS | 1 | 0.736 | 0.850 | 19.963 | 14.482 | 14.482 | 0.000 | 0.000 | 0.000 | 0.000 |
| 125 | A | 126 | VAL | 0 | -0.028 | -0.004 | 15.087 | 0.015 | 0.015 | 0.000 | 0.000 | 0.000 | 0.000 |
| 126 | A | 127 | GLY | 0 | -0.023 | 0.001 | 16.647 | -0.781 | -0.781 | 0.000 | 0.000 | 0.000 | 0.000 |
| 127 | A | 128 | GLY | 0 | -0.020 | -0.015 | 18.131 | 0.308 | 0.308 | 0.000 | 0.000 | 0.000 | 0.000 |
| 128 | A | 129 | GLY | 0 | 0.017 | 0.001 | 14.935 | -0.673 | -0.673 | 0.000 | 0.000 | 0.000 | 0.000 |
| 129 | A | 130 | ALA | 0 | -0.063 | -0.019 | 14.030 | 0.488 | 0.488 | 0.000 | 0.000 | 0.000 | 0.000 |
| 130 | A | 131 | ILE | 0 | 0.035 | 0.014 | 16.009 | -0.334 | -0.334 | 0.000 | 0.000 | 0.000 | 0.000 |
| 131 | A | 132 | VAL | 0 | -0.030 | -0.010 | 14.898 | 0.314 | 0.314 | 0.000 | 0.000 | 0.000 | 0.000 |
| 132 | A | 133 | ASN | 0 | 0.017 | -0.007 | 17.929 | -0.192 | -0.192 | 0.000 | 0.000 | 0.000 | 0.000 |
| 133 | A | 134 | VAL | 0 | 0.017 | 0.014 | 19.189 | -0.183 | -0.183 | 0.000 | 0.000 | 0.000 | 0.000 |
| 134 | A | 135 | ALA | 0 | 0.010 | 0.015 | 21.652 | 0.708 | 0.708 | 0.000 | 0.000 | 0.000 | 0.000 |
| 135 | A | 136 | SER | 0 | -0.003 | -0.017 | 24.624 | 0.011 | 0.011 | 0.000 | 0.000 | 0.000 | 0.000 |
| 136 | A | 137 | VAL | 0 | 0.043 | 0.024 | 26.359 | 0.164 | 0.164 | 0.000 | 0.000 | 0.000 | 0.000 |
| 137 | A | 138 | GLN | 0 | -0.012 | -0.018 | 28.652 | 0.447 | 0.447 | 0.000 | 0.000 | 0.000 | 0.000 |
| 138 | A | 139 | GLY | 0 | 0.025 | 0.007 | 29.475 | 0.202 | 0.202 | 0.000 | 0.000 | 0.000 | 0.000 |
| 139 | A | 140 | LEU | 0 | -0.099 | -0.046 | 27.494 | 0.026 | 0.026 | 0.000 | 0.000 | 0.000 | 0.000 |
| 140 | A | 141 | PHE | 0 | 0.005 | 0.002 | 31.598 | 0.313 | 0.313 | 0.000 | 0.000 | 0.000 | 0.000 |
| 141 | A | 142 | ALA | 0 | -0.028 | -0.018 | 33.860 | -0.176 | -0.176 | 0.000 | 0.000 | 0.000 | 0.000 |
| 142 | A | 143 | GLU | -1 | -0.811 | -0.890 | 34.937 | -9.037 | -9.037 | 0.000 | 0.000 | 0.000 | 0.000 |
| 143 | A | 144 | GLN | 0 | -0.041 | -0.031 | 37.764 | 0.242 | 0.242 | 0.000 | 0.000 | 0.000 | 0.000 |
| 144 | A | 145 | GLU | -1 | -0.957 | -0.985 | 39.741 | -7.304 | -7.304 | 0.000 | 0.000 | 0.000 | 0.000 |
| 145 | A | 146 | ASN | 0 | 0.046 | 0.024 | 33.597 | -0.046 | -0.046 | 0.000 | 0.000 | 0.000 | 0.000 |
| 146 | A | 147 | ALA | 0 | 0.024 | 0.013 | 36.622 | -0.215 | -0.215 | 0.000 | 0.000 | 0.000 | 0.000 |
| 147 | A | 148 | ALA | 0 | 0.014 | 0.000 | 37.061 | -0.083 | -0.083 | 0.000 | 0.000 | 0.000 | 0.000 |
| 148 | A | 149 | TYR | 0 | 0.006 | 0.027 | 27.887 | -0.390 | -0.390 | 0.000 | 0.000 | 0.000 | 0.000 |
| 149 | A | 150 | ASN | 0 | 0.004 | -0.007 | 32.625 | -0.006 | -0.006 | 0.000 | 0.000 | 0.000 | 0.000 |
| 150 | A | 151 | ALA | 0 | -0.007 | 0.004 | 33.872 | -0.152 | -0.152 | 0.000 | 0.000 | 0.000 | 0.000 |
| 151 | A | 152 | SER | 0 | -0.017 | -0.020 | 32.187 | -0.245 | -0.245 | 0.000 | 0.000 | 0.000 | 0.000 |
| 152 | A | 153 | LYS | 1 | 0.884 | 0.949 | 25.372 | 11.825 | 11.825 | 0.000 | 0.000 | 0.000 | 0.000 |
| 153 | A | 154 | GLY | 0 | 0.038 | 0.023 | 29.481 | -0.307 | -0.307 | 0.000 | 0.000 | 0.000 | 0.000 |
| 154 | A | 155 | GLY | 0 | -0.025 | -0.013 | 31.702 | -0.050 | -0.050 | 0.000 | 0.000 | 0.000 | 0.000 |
| 155 | A | 156 | LEU | 0 | -0.005 | 0.002 | 24.726 | -0.149 | -0.149 | 0.000 | 0.000 | 0.000 | 0.000 |
| 156 | A | 157 | VAL | 0 | -0.003 | 0.007 | 27.018 | -0.452 | -0.452 | 0.000 | 0.000 | 0.000 | 0.000 |
| 157 | A | 158 | ASN | 0 | 0.005 | 0.002 | 28.028 | -0.292 | -0.292 | 0.000 | 0.000 | 0.000 | 0.000 |
| 158 | A | 159 | LEU | 0 | 0.016 | 0.011 | 27.366 | -0.009 | -0.009 | 0.000 | 0.000 | 0.000 | 0.000 |
| 159 | A | 160 | THR | 0 | -0.014 | -0.018 | 23.064 | -0.411 | -0.411 | 0.000 | 0.000 | 0.000 | 0.000 |
| 160 | A | 161 | ARG | 1 | 0.912 | 0.953 | 25.374 | 10.449 | 10.449 | 0.000 | 0.000 | 0.000 | 0.000 |
| 161 | A | 162 | SER | 0 | -0.033 | -0.007 | 27.808 | 0.115 | 0.115 | 0.000 | 0.000 | 0.000 | 0.000 |
| 162 | A | 163 | LEU | 0 | 0.021 | 0.002 | 24.572 | -0.090 | -0.090 | 0.000 | 0.000 | 0.000 | 0.000 |
| 163 | A | 164 | ALA | 0 | -0.014 | 0.004 | 23.985 | -0.329 | -0.329 | 0.000 | 0.000 | 0.000 | 0.000 |
| 164 | A | 165 | LEU | 0 | -0.038 | -0.015 | 24.969 | -0.137 | -0.137 | 0.000 | 0.000 | 0.000 | 0.000 |
| 165 | A | 166 | ASP | -1 | -0.861 | -0.939 | 28.191 | -10.607 | -10.607 | 0.000 | 0.000 | 0.000 | 0.000 |
| 166 | A | 167 | LEU | 0 | -0.045 | -0.028 | 23.093 | -0.007 | -0.007 | 0.000 | 0.000 | 0.000 | 0.000 |
| 167 | A | 168 | ALA | 0 | 0.055 | 0.044 | 23.458 | -0.524 | -0.524 | 0.000 | 0.000 | 0.000 | 0.000 |
| 168 | A | 169 | PRO | 0 | -0.042 | -0.027 | 24.255 | -0.326 | -0.326 | 0.000 | 0.000 | 0.000 | 0.000 |
| 169 | A | 170 | LEU | 0 | -0.061 | -0.025 | 23.163 | 0.040 | 0.040 | 0.000 | 0.000 | 0.000 | 0.000 |
| 170 | A | 171 | ARG | 1 | 0.909 | 0.955 | 18.616 | 15.384 | 15.384 | 0.000 | 0.000 | 0.000 | 0.000 |
| 171 | A | 172 | ILE | 0 | -0.025 | 0.006 | 18.813 | -1.116 | -1.116 | 0.000 | 0.000 | 0.000 | 0.000 |
| 172 | A | 173 | ARG | 1 | 0.783 | 0.907 | 13.843 | 21.383 | 21.383 | 0.000 | 0.000 | 0.000 | 0.000 |
| 173 | A | 174 | VAL | 0 | -0.002 | -0.004 | 18.801 | -0.668 | -0.668 | 0.000 | 0.000 | 0.000 | 0.000 |
| 174 | A | 175 | ASN | 0 | 0.005 | -0.014 | 17.748 | 1.244 | 1.244 | 0.000 | 0.000 | 0.000 | 0.000 |
| 175 | A | 176 | ALA | 0 | 0.013 | 0.009 | 20.473 | -0.095 | -0.095 | 0.000 | 0.000 | 0.000 | 0.000 |
| 176 | A | 177 | VAL | 0 | 0.012 | 0.024 | 17.132 | -0.079 | -0.079 | 0.000 | 0.000 | 0.000 | 0.000 |
| 177 | A | 178 | ALA | 0 | 0.001 | -0.015 | 20.306 | 0.419 | 0.419 | 0.000 | 0.000 | 0.000 | 0.000 |
| 178 | A | 179 | PRO | 0 | -0.020 | -0.005 | 20.950 | 0.248 | 0.248 | 0.000 | 0.000 | 0.000 | 0.000 |
| 179 | A | 180 | GLY | 0 | 0.050 | 0.027 | 23.458 | 0.545 | 0.545 | 0.000 | 0.000 | 0.000 | 0.000 |
| 180 | A | 181 | ALA | 0 | -0.023 | -0.001 | 26.097 | -0.124 | -0.124 | 0.000 | 0.000 | 0.000 | 0.000 |
| 181 | A | 182 | ILE | 0 | -0.016 | -0.004 | 21.307 | -0.255 | -0.255 | 0.000 | 0.000 | 0.000 | 0.000 |
| 182 | A | 183 | ALA | 0 | 0.040 | 0.021 | 23.958 | 0.331 | 0.331 | 0.000 | 0.000 | 0.000 | 0.000 |
| 183 | A | 184 | THR | 0 | -0.051 | -0.034 | 22.299 | -0.392 | -0.392 | 0.000 | 0.000 | 0.000 | 0.000 |
| 184 | A | 185 | GLU | -1 | -0.835 | -0.921 | 24.540 | -12.336 | -12.336 | 0.000 | 0.000 | 0.000 | 0.000 |
| 185 | A | 186 | ALA | 0 | 0.015 | 0.013 | 27.059 | 0.364 | 0.364 | 0.000 | 0.000 | 0.000 | 0.000 |
| 186 | A | 187 | VAL | 0 | -0.010 | 0.007 | 27.754 | 0.380 | 0.380 | 0.000 | 0.000 | 0.000 | 0.000 |
| 187 | A | 188 | LEU | 0 | -0.003 | -0.006 | 26.328 | 0.363 | 0.363 | 0.000 | 0.000 | 0.000 | 0.000 |
| 188 | A | 189 | GLU | -1 | -0.923 | -0.972 | 30.312 | -9.922 | -9.922 | 0.000 | 0.000 | 0.000 | 0.000 |
| 189 | A | 190 | ALA | 0 | -0.022 | -0.003 | 32.655 | 0.324 | 0.324 | 0.000 | 0.000 | 0.000 | 0.000 |
| 190 | A | 191 | ILE | 0 | -0.040 | -0.038 | 30.950 | 0.280 | 0.280 | 0.000 | 0.000 | 0.000 | 0.000 |
| 191 | A | 192 | ALA | 0 | -0.005 | -0.012 | 31.858 | 0.061 | 0.061 | 0.000 | 0.000 | 0.000 | 0.000 |
| 192 | A | 193 | LEU | 0 | -0.049 | -0.014 | 33.835 | 0.146 | 0.146 | 0.000 | 0.000 | 0.000 | 0.000 |
| 193 | A | 194 | SER | 0 | -0.007 | -0.006 | 35.738 | 0.250 | 0.250 | 0.000 | 0.000 | 0.000 | 0.000 |
| 194 | A | 195 | PRO | 0 | 0.005 | 0.013 | 37.232 | 0.091 | 0.091 | 0.000 | 0.000 | 0.000 | 0.000 |
| 195 | A | 196 | ASP | -1 | -0.876 | -0.960 | 34.381 | -9.088 | -9.088 | 0.000 | 0.000 | 0.000 | 0.000 |
| 196 | A | 197 | PRO | 0 | 0.015 | 0.005 | 37.265 | -0.026 | -0.026 | 0.000 | 0.000 | 0.000 | 0.000 |
| 197 | A | 198 | GLU | -1 | -0.907 | -0.930 | 40.191 | -7.115 | -7.115 | 0.000 | 0.000 | 0.000 | 0.000 |
| 198 | A | 199 | ARG | 1 | 0.853 | 0.911 | 40.267 | 7.754 | 7.754 | 0.000 | 0.000 | 0.000 | 0.000 |
| 199 | A | 200 | THR | 0 | 0.045 | 0.013 | 36.876 | -0.099 | -0.099 | 0.000 | 0.000 | 0.000 | 0.000 |
| 200 | A | 201 | ARG | 1 | 0.776 | 0.925 | 30.604 | 9.549 | 9.549 | 0.000 | 0.000 | 0.000 | 0.000 |
| 201 | A | 202 | ARG | 1 | 0.882 | 0.922 | 33.572 | 7.665 | 7.665 | 0.000 | 0.000 | 0.000 | 0.000 |
| 202 | A | 203 | ASP | -1 | -0.853 | -0.907 | 35.021 | -8.110 | -8.110 | 0.000 | 0.000 | 0.000 | 0.000 |
| 203 | A | 204 | TRP | 0 | 0.028 | -0.009 | 31.814 | -0.046 | -0.046 | 0.000 | 0.000 | 0.000 | 0.000 |
| 204 | A | 205 | GLU | -1 | -0.858 | -0.920 | 30.042 | -10.403 | -10.403 | 0.000 | 0.000 | 0.000 | 0.000 |
| 205 | A | 206 | ASP | -1 | -0.827 | -0.912 | 31.408 | -8.912 | -8.912 | 0.000 | 0.000 | 0.000 | 0.000 |
| 206 | A | 207 | LEU | 0 | -0.025 | 0.009 | 32.151 | 0.070 | 0.070 | 0.000 | 0.000 | 0.000 | 0.000 |
| 207 | A | 208 | HIS | 0 | -0.021 | -0.009 | 26.655 | -0.538 | -0.538 | 0.000 | 0.000 | 0.000 | 0.000 |
| 208 | A | 209 | ALA | 0 | 0.056 | 0.034 | 29.324 | 0.185 | 0.185 | 0.000 | 0.000 | 0.000 | 0.000 |
| 209 | A | 210 | LEU | 0 | -0.083 | -0.054 | 23.923 | 0.036 | 0.036 | 0.000 | 0.000 | 0.000 | 0.000 |
| 210 | A | 211 | ARG | 1 | 0.780 | 0.876 | 28.270 | 8.879 | 8.879 | 0.000 | 0.000 | 0.000 | 0.000 |
| 211 | A | 212 | ARG | 1 | 0.793 | 0.862 | 21.087 | 13.412 | 13.412 | 0.000 | 0.000 | 0.000 | 0.000 |
| 212 | A | 213 | LEU | 0 | 0.036 | 0.029 | 26.370 | -0.114 | -0.114 | 0.000 | 0.000 | 0.000 | 0.000 |
| 213 | A | 214 | GLY | 0 | 0.028 | 0.025 | 22.705 | -0.318 | -0.318 | 0.000 | 0.000 | 0.000 | 0.000 |
| 214 | A | 215 | LYS | 1 | 0.937 | 0.960 | 17.374 | 16.760 | 16.760 | 0.000 | 0.000 | 0.000 | 0.000 |
| 215 | A | 216 | PRO | 0 | 0.025 | -0.004 | 18.345 | -0.341 | -0.341 | 0.000 | 0.000 | 0.000 | 0.000 |
| 216 | A | 217 | GLU | -1 | -0.850 | -0.949 | 14.054 | -17.797 | -17.797 | 0.000 | 0.000 | 0.000 | 0.000 |
| 217 | A | 218 | GLU | -1 | -0.806 | -0.864 | 14.184 | -16.109 | -16.109 | 0.000 | 0.000 | 0.000 | 0.000 |
| 218 | A | 219 | VAL | 0 | 0.007 | 0.007 | 16.116 | -0.220 | -0.220 | 0.000 | 0.000 | 0.000 | 0.000 |
| 219 | A | 220 | ALA | 0 | 0.010 | 0.013 | 12.328 | -0.555 | -0.555 | 0.000 | 0.000 | 0.000 | 0.000 |
| 220 | A | 221 | GLU | -1 | -0.772 | -0.860 | 9.362 | -31.106 | -31.106 | 0.000 | 0.000 | 0.000 | 0.000 |
| 221 | A | 222 | ALA | 0 | -0.009 | 0.008 | 11.763 | -0.826 | -0.826 | 0.000 | 0.000 | 0.000 | 0.000 |
| 222 | A | 223 | VAL | 0 | 0.004 | -0.011 | 12.877 | 0.093 | 0.093 | 0.000 | 0.000 | 0.000 | 0.000 |
| 223 | A | 224 | LEU | 0 | -0.011 | 0.004 | 6.961 | -1.092 | -1.092 | 0.000 | 0.000 | 0.000 | 0.000 |
| 224 | A | 225 | PHE | 0 | 0.000 | -0.008 | 9.982 | -1.114 | -1.114 | 0.000 | 0.000 | 0.000 | 0.000 |
| 225 | A | 226 | LEU | 0 | 0.023 | 0.018 | 11.512 | -0.228 | -0.228 | 0.000 | 0.000 | 0.000 | 0.000 |
| 226 | A | 227 | ALA | 0 | 0.050 | 0.030 | 11.088 | 0.948 | 0.948 | 0.000 | 0.000 | 0.000 | 0.000 |
| 227 | A | 228 | SER | 0 | -0.056 | -0.036 | 8.761 | -0.899 | -0.899 | 0.000 | 0.000 | 0.000 | 0.000 |
| 228 | A | 229 | GLU | -1 | -0.894 | -0.962 | 9.754 | -29.018 | -29.018 | 0.000 | 0.000 | 0.000 | 0.000 |
| 229 | A | 230 | LYS | 1 | 0.906 | 0.947 | 7.791 | 35.030 | 35.030 | 0.000 | 0.000 | 0.000 | 0.000 |
| 230 | A | 231 | ALA | 0 | 0.013 | 0.026 | 12.302 | 1.786 | 1.786 | 0.000 | 0.000 | 0.000 | 0.000 |
| 231 | A | 232 | SER | 0 | -0.002 | -0.008 | 14.902 | 1.547 | 1.547 | 0.000 | 0.000 | 0.000 | 0.000 |
| 232 | A | 233 | PHE | 0 | -0.033 | -0.018 | 16.275 | 0.807 | 0.807 | 0.000 | 0.000 | 0.000 | 0.000 |
| 233 | A | 234 | ILE | 0 | -0.018 | 0.003 | 17.025 | 0.808 | 0.808 | 0.000 | 0.000 | 0.000 | 0.000 |
| 234 | A | 235 | THR | 0 | 0.053 | 0.026 | 18.982 | -1.039 | -1.039 | 0.000 | 0.000 | 0.000 | 0.000 |
| 235 | A | 236 | GLY | 0 | 0.016 | 0.008 | 21.691 | 0.537 | 0.537 | 0.000 | 0.000 | 0.000 | 0.000 |
| 236 | A | 237 | ALA | 0 | -0.041 | -0.011 | 21.141 | 0.553 | 0.553 | 0.000 | 0.000 | 0.000 | 0.000 |
| 237 | A | 238 | ILE | 0 | -0.013 | -0.018 | 22.307 | -0.326 | -0.326 | 0.000 | 0.000 | 0.000 | 0.000 |
| 238 | A | 239 | LEU | 0 | 0.007 | 0.007 | 17.663 | 0.292 | 0.292 | 0.000 | 0.000 | 0.000 | 0.000 |
| 239 | A | 240 | PRO | 0 | 0.033 | 0.014 | 21.620 | -0.370 | -0.370 | 0.000 | 0.000 | 0.000 | 0.000 |
| 240 | A | 241 | VAL | 0 | -0.042 | -0.022 | 18.686 | -0.523 | -0.523 | 0.000 | 0.000 | 0.000 | 0.000 |
| 241 | A | 242 | ASP | -1 | -0.736 | -0.870 | 21.701 | -11.689 | -11.689 | 0.000 | 0.000 | 0.000 | 0.000 |
| 242 | A | 243 | GLY | 0 | 0.010 | 0.017 | 23.926 | 0.427 | 0.427 | 0.000 | 0.000 | 0.000 | 0.000 |
| 243 | A | 244 | GLY | 0 | 0.030 | 0.000 | 25.482 | 0.324 | 0.324 | 0.000 | 0.000 | 0.000 | 0.000 |
| 244 | A | 245 | MET | 0 | -0.022 | 0.004 | 27.816 | 0.333 | 0.333 | 0.000 | 0.000 | 0.000 | 0.000 |
| 245 | A | 246 | THR | 0 | -0.086 | -0.074 | 28.174 | 0.282 | 0.282 | 0.000 | 0.000 | 0.000 | 0.000 |
| 246 | A | 247 | ALA | 0 | -0.054 | -0.017 | 30.178 | 0.134 | 0.134 | 0.000 | 0.000 | 0.000 | 0.000 |
| 247 | A | 248 | SER | 0 | -0.053 | -0.055 | 31.995 | 0.328 | 0.328 | 0.000 | 0.000 | 0.000 | 0.000 |
| 248 | A | 249 | PHE | 0 | -0.032 | -0.019 | 35.055 | -0.112 | -0.112 | 0.000 | 0.000 | 0.000 | 0.000 |
| 249 | A | 250 | MET | -1 | -0.938 | -0.920 | 37.141 | -8.148 | -8.148 | 0.000 | 0.000 | 0.000 | 0.000 |