FMODB

FMODB: The database of quantum mechanical data based on the FMO method

Last updated: 2025-10-17

All entries: 77277

Number of unique PDB entries: 32023

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FMODB ID: 46RLN

Calculation Name: 2MOQ-A-Other547

Preferred Name:

Target Type:

Ligand Name:

Ligand 3-letter code:

Ligand of Interest (LOI):

Structure Source: PDB

PDB ID: 2MOQ

Chain ID: A

ChEMBL ID:

UniProt ID: Q8NX66

Base Structure: SolutionNMR

Registration Date: 2025-10-04

Reference: Sci Data 11, 1164 (2024).

DOI: https://doi.org/10.1038/s41597-024-03999-2

Apendix: None


IFIE MAP

IFIE Diagram


Modeling method
Optimization MOE:Amber10:EHT
Restraint OptAll
Protonation MOE:Protonate 3D
Complement MOE:Homology Modeling
Water No
Procedure Manual calculation
Remarks
ac.sh, 23 2024 Oct; Missing atoms/residues were imported from a 100% homology model, which was constructed by MOE.
FMO calculation
FMO method FMO2-MP2/6-31G(d)
Fragmentation Auto
Number of fragment 148
LigandResidueName
LigandFragmentNumber 0
LigandCharge
Software ABINIT-MP - Open Ver. 1 Rev. 23 (BINDS Ver. 1) / 20230922
Total energy (hartree)
FMO2-HF: Electronic energy -1429789.919376
FMO2-HF: Nuclear repulsion 1370131.020175
FMO2-HF: Total energy -59658.899201
FMO2-MP2: Total energy -59835.751846


3D Structure Molmil
Snapshot
 
Ligand structure

ligand structure
Ligand Interaction
ligand interaction
Ligand binding energy
IFIE [kcal/mol] PIEDA [kcal/mol] Charge transfer value [e]
IFIE SUMIFIE SUM at MP2 level. ESElectro static interaction energy. EXExchange-repulsion energy. CT+mixCharge transfer and mixing terms energy. DI(MP2)Dispersion energy. q(I=>J)Charge transfer value from I to J fragments.
N/AN/AN/AN/AN/AN/A


Interactive mode: IFIE and PIEDA for fragment #1(A:125:LEU)


Summations of interaction energy for fragment #1(A:125:LEU)
IFIE [kcal/mol] PIEDA [kcal/mol] Charge transfer value [e]
IFIE SUMIFIE SUM at MP2 level. ESElectro static interaction energy. EXExchange-repulsion energy. CT+mixCharge transfer and mixing terms energy. DI(MP2)Dispersion energy. q(I=>J)Charge transfer value from I to J fragments.
-21.042-10.46213.219-10.263-13.532-0.107
Interaction energy analysis for fragmet #1(A:125:LEU)
Snapshot

IFIE Diagram

Base fragment(s) of PIEDA/IFIE
Single fragment Multi fragments
Fragment list
Charge [e] FCHARGE : 1 / q_Mulliken : 0.774 / q_NPA : 0.880
Distance from base fragment(s) [Å]
Dist
Interaction energy by IFIE and PIEDA
[kcal/mol]
| Total | > | ES | > | EX | >
| CT+mix | > | DI(MP2) | >
Fragment charge [e]
FCHARGE q_Mulliken
q_NPA q(I=>J)
Residue
Res #    RES   
Sort
Graph Options
X Axis Label
Y Axis Max Y Axis Min
Display   
frag_NumFragment number. ChainChain species. Res #Residue number. RES3-letter code of amino acid residue, ligand and solvent molecule. FCHARGEFormal charge [e]. q_MullikenFragment charge evaluated by Mulliken charge [e]. q_NPAFragment charge evaluated by natural population analysis(NPA) charge [e]. DISTDistance from Ligand [Å]. TotalIFIE at MP2 level [kcal/mol]. ESElectro static interaction energy by PIEDA [kcal/mol]. EXExchange-repulsion energy by PIEDA [kcal/mol]. CT+mixCharge transfer and mixing terms energy by PIEDA [kcal/mol]. DI(MP2)Dispersion energy by PIEDA [kcal/mol]. q(I=>J)Charge transfer value from I to J fragmens [e].
3A127GLN00.0740.0492.742-0.8643.2780.128-1.878-2.391-0.007
4A128GLU-1-0.877-0.9342.611-35.417-33.4630.701-1.140-1.516-0.016
5A129LEU0-0.029-0.0174.372-0.0880.131-0.001-0.013-0.2050.000
6A130ARG10.9000.9255.16019.79019.820-0.001-0.001-0.0270.000
74A198PHE00.008-0.0074.5293.3683.471-0.001-0.005-0.0960.000
75A199GLU-1-0.837-0.8914.585-35.617-35.507-0.001-0.010-0.0980.000
85A209ILE00.0220.0172.368-1.558-0.2630.938-0.543-1.690-0.003
86A210LYS10.8500.9241.850-13.637-11.0958.125-5.900-4.767-0.075
87A211LEU00.0360.0062.4375.5045.4783.332-0.745-2.561-0.006
88A212VAL0-0.0210.0024.7540.4160.455-0.001-0.010-0.0280.000
99A223ILE0-0.0130.0043.948-2.766-2.5940.000-0.018-0.1530.000
7A131GLU-1-0.927-0.9607.470-23.222-23.2220.0000.0000.0000.000
8A132ALA0-0.040-0.0054.8981.2341.2340.0000.0000.0000.000
9A133ILE00.000-0.0057.0611.5831.5830.0000.0000.0000.000
10A134LYS10.9580.97410.18519.92019.9200.0000.0000.0000.000
11A135ASN0-0.034-0.0128.6200.4520.4520.0000.0000.0000.000
12A136PRO00.0430.01110.716-0.408-0.4080.0000.0000.0000.000
13A137ALA0-0.0110.00610.4390.6830.6830.0000.0000.0000.000
14A138ILE00.0150.0097.7430.4730.4730.0000.0000.0000.000
15A139LYS10.8370.91011.19117.03617.0360.0000.0000.0000.000
16A140ASP-1-0.860-0.90913.591-15.732-15.7320.0000.0000.0000.000
17A141LYS10.8570.93213.99219.65819.6580.0000.0000.0000.000
18A142ASP-1-0.788-0.89914.844-17.229-17.2290.0000.0000.0000.000
19A143HIS0-0.078-0.03913.7850.4910.4910.0000.0000.0000.000
20A144SER0-0.018-0.01915.855-0.475-0.4750.0000.0000.0000.000
21A145ALA00.0290.01518.6830.6750.6750.0000.0000.0000.000
22A146PRO00.0240.00320.885-0.247-0.2470.0000.0000.0000.000
23A147ASN0-0.035-0.00819.9070.3170.3170.0000.0000.0000.000
24A148SER0-0.005-0.01018.429-0.860-0.8600.0000.0000.0000.000
25A149ARG10.9590.97919.95213.03213.0320.0000.0000.0000.000
26A150PRO00.0110.01319.618-0.793-0.7930.0000.0000.0000.000
27A151ILE0-0.050-0.02017.7430.3950.3950.0000.0000.0000.000
28A152ASP-1-0.816-0.91719.093-14.050-14.0500.0000.0000.0000.000
29A153PHE0-0.079-0.05115.195-0.197-0.1970.0000.0000.0000.000
30A154GLU-1-0.787-0.86520.285-11.209-11.2090.0000.0000.0000.000
31A155MET0-0.047-0.04514.350-1.046-1.0460.0000.0000.0000.000
32A156LYS10.8940.94419.50512.14412.1440.0000.0000.0000.000
33A157LYS10.8270.90519.82112.12312.1230.0000.0000.0000.000
34A158LYS10.9480.96021.66910.79910.7990.0000.0000.0000.000
35A159ASP-1-0.914-0.95624.061-10.791-10.7910.0000.0000.0000.000
36A160GLY00.0390.03225.7930.1890.1890.0000.0000.0000.000
37A161THR0-0.029-0.01020.856-0.032-0.0320.0000.0000.0000.000
38A162GLN00.0300.00422.5240.0030.0030.0000.0000.0000.000
39A163GLN0-0.005-0.01117.0190.5290.5290.0000.0000.0000.000
40A164PHE00.0210.00820.256-0.122-0.1220.0000.0000.0000.000
41A165TYR0-0.0210.00821.6830.2430.2430.0000.0000.0000.000
42A166HIS0-0.025-0.02117.8780.5260.5260.0000.0000.0000.000
43A167TYR00.0460.01117.901-0.489-0.4890.0000.0000.0000.000
44A168ALA0-0.0020.02312.583-0.377-0.3770.0000.0000.0000.000
45A169SER0-0.027-0.03013.439-0.708-0.7080.0000.0000.0000.000
46A170SER0-0.029-0.00114.9750.2430.2430.0000.0000.0000.000
47A171VAL00.0090.01516.643-0.949-0.9490.0000.0000.0000.000
48A172LYS10.8300.90412.95118.12718.1270.0000.0000.0000.000
49A173PRO00.0580.05017.624-0.255-0.2550.0000.0000.0000.000
50A174ALA0-0.051-0.02614.481-1.058-1.0580.0000.0000.0000.000
51A175ARG10.8500.91714.79619.09219.0920.0000.0000.0000.000
52A176VAL00.0120.00915.027-1.495-1.4950.0000.0000.0000.000
53A177ILE0-0.024-0.02314.3240.8590.8590.0000.0000.0000.000
54A178PHE0-0.033-0.01417.3220.0680.0680.0000.0000.0000.000
55A179THR00.0130.00315.319-0.887-0.8870.0000.0000.0000.000
56A180ASP-1-0.761-0.86917.664-16.433-16.4330.0000.0000.0000.000
57A181SER0-0.059-0.03319.4970.1250.1250.0000.0000.0000.000
58A182LYS10.9330.97715.28418.77918.7790.0000.0000.0000.000
59A183PRO00.0360.03616.001-0.569-0.5690.0000.0000.0000.000
60A184GLU-1-0.761-0.85710.622-28.256-28.2560.0000.0000.0000.000
61A185ILE0-0.019-0.00811.5231.8671.8670.0000.0000.0000.000
62A186GLU-1-0.769-0.84810.472-24.471-24.4710.0000.0000.0000.000
63A187LEU00.007-0.0039.2261.8331.8330.0000.0000.0000.000
64A188GLY00.0550.0219.561-1.846-1.8460.0000.0000.0000.000
65A189LEU0-0.046-0.0139.4340.9750.9750.0000.0000.0000.000
66A190GLN00.0340.00712.871-0.136-0.1360.0000.0000.0000.000
67A191SER00.010-0.00414.5630.1400.1400.0000.0000.0000.000
68A192GLY00.0120.01111.010-0.767-0.7670.0000.0000.0000.000
69A193GLN0-0.075-0.05110.878-0.866-0.8660.0000.0000.0000.000
70A194PHE0-0.0130.00013.1960.2970.2970.0000.0000.0000.000
71A195TRP00.0490.0118.089-0.530-0.5300.0000.0000.0000.000
72A196ARG10.8360.9378.60919.72919.7290.0000.0000.0000.000
73A197LYS10.8900.9265.16325.93325.9330.0000.0000.0000.000
76A200VAL00.0250.0197.1412.9852.9850.0000.0000.0000.000
77A201TYR0-0.045-0.0429.595-1.266-1.2660.0000.0000.0000.000
78A202GLU-1-0.749-0.83913.194-15.570-15.5700.0000.0000.0000.000
79A203GLY00.002-0.00516.4410.2820.2820.0000.0000.0000.000
80A204ASP-1-0.931-0.96716.810-18.724-18.7240.0000.0000.0000.000
81A205LYS10.9640.98314.14117.31817.3180.0000.0000.0000.000
82A206LYS10.9900.9978.13033.10733.1070.0000.0000.0000.000
83A207LEU0-0.0010.0089.757-0.135-0.1350.0000.0000.0000.000
84A208PRO0-0.057-0.0225.620-3.459-3.4590.0000.0000.0000.000
89A213SER0-0.049-0.0328.5362.3172.3170.0000.0000.0000.000
90A214TYR0-0.0040.0105.373-2.057-2.0570.0000.0000.0000.000
91A215ASP-1-0.805-0.91511.703-14.543-14.5430.0000.0000.0000.000
92A216THR0-0.015-0.02014.0170.2340.2340.0000.0000.0000.000
93A217VAL0-0.018-0.00115.8820.5260.5260.0000.0000.0000.000
94A218LYS10.9520.98317.34514.60914.6090.0000.0000.0000.000
95A219ASP-1-0.808-0.89015.323-16.511-16.5110.0000.0000.0000.000
96A220TYR0-0.011-0.00613.495-0.500-0.5000.0000.0000.0000.000
97A221ALA00.010-0.0178.223-0.862-0.8620.0000.0000.0000.000
98A222TYR0-0.045-0.0418.8580.7130.7130.0000.0000.0000.000
100A224ARG10.8030.8586.10927.76727.7670.0000.0000.0000.000
101A225PHE00.019-0.0036.482-6.515-6.5150.0000.0000.0000.000
102A226SER00.0310.0218.2752.2082.2080.0000.0000.0000.000
103A227VAL0-0.030-0.01810.735-1.182-1.1820.0000.0000.0000.000
104A228SER0-0.038-0.03813.7650.0760.0760.0000.0000.0000.000
105A229ASN0-0.027-0.02516.6010.1640.1640.0000.0000.0000.000
106A230GLY00.0370.01420.0940.6160.6160.0000.0000.0000.000
107A231THR0-0.093-0.05816.5660.2050.2050.0000.0000.0000.000
108A232LYS10.9730.97419.70212.28712.2870.0000.0000.0000.000
109A233ALA00.0320.02219.7300.2640.2640.0000.0000.0000.000
110A234VAL0-0.036-0.01913.563-0.428-0.4280.0000.0000.0000.000
111A235LYS10.9170.97114.82618.34318.3430.0000.0000.0000.000
112A236ILE0-0.004-0.01011.020-1.792-1.7920.0000.0000.0000.000
113A237VAL00.0010.0269.0211.3481.3480.0000.0000.0000.000
114A238SER00.000-0.0059.113-1.627-1.6270.0000.0000.0000.000
115A239SER00.0040.0109.5551.9611.9610.0000.0000.0000.000
116A240THR00.0440.01510.561-1.434-1.4340.0000.0000.0000.000
117A241HIS0-0.064-0.04613.3790.4350.4350.0000.0000.0000.000
118A242PHE00.0260.01315.109-0.623-0.6230.0000.0000.0000.000
119A243ASN00.0020.01817.6800.6980.6980.0000.0000.0000.000
120A244ASN0-0.004-0.01520.840-0.151-0.1510.0000.0000.0000.000
121A245LYS10.9120.96420.25913.12513.1250.0000.0000.0000.000
122A246GLU-1-0.828-0.90117.408-15.821-15.8210.0000.0000.0000.000
123A247GLU-1-0.836-0.91816.663-13.380-13.3800.0000.0000.0000.000
124A248LYS10.8330.90113.37416.19716.1970.0000.0000.0000.000
125A249TYR00.0100.00710.867-0.125-0.1250.0000.0000.0000.000
126A250ASP-1-0.778-0.85115.323-13.749-13.7490.0000.0000.0000.000
127A251TYR0-0.052-0.05416.518-0.499-0.4990.0000.0000.0000.000
128A252THR0-0.047-0.03814.4530.5330.5330.0000.0000.0000.000
129A253LEU0-0.041-0.00516.419-0.663-0.6630.0000.0000.0000.000
130A254MET0-0.029-0.00315.8980.1610.1610.0000.0000.0000.000
131A255GLU-1-0.911-0.96817.867-12.026-12.0260.0000.0000.0000.000
132A256PHE0-0.015-0.01120.710-0.052-0.0520.0000.0000.0000.000
133A257ALA00.0620.04621.6090.5170.5170.0000.0000.0000.000
134A258GLN0-0.011-0.01722.8560.3710.3710.0000.0000.0000.000
135A259PRO0-0.011-0.01522.252-0.601-0.6010.0000.0000.0000.000
136A260ILE0-0.0040.01516.486-0.013-0.0130.0000.0000.0000.000
137A261TYR0-0.007-0.00919.616-0.449-0.4490.0000.0000.0000.000
138A262ASN0-0.038-0.02820.2130.2170.2170.0000.0000.0000.000
139A263SER0-0.061-0.02421.7280.5050.5050.0000.0000.0000.000
140A264ALA00.0500.01324.8540.2630.2630.0000.0000.0000.000
141A265ASP-1-0.888-0.92126.042-9.659-9.6590.0000.0000.0000.000
142A266LYS10.8160.89327.99310.51610.5160.0000.0000.0000.000
143A267PHE00.0430.03021.6510.0410.0410.0000.0000.0000.000
144A268LYS10.8490.91523.91611.99511.9950.0000.0000.0000.000
145A269THR0-0.006-0.02223.189-0.712-0.7120.0000.0000.0000.000
146A270GLU-1-0.961-0.97825.279-10.107-10.1070.0000.0000.0000.000
147A271GLU-1-1.010-0.99826.393-12.243-12.2430.0000.0000.0000.000
148A272ASP-2-1.899-1.93028.995-19.666-19.6660.0000.0000.0000.000