FMODB

FMODB: The database of quantum mechanical data based on the FMO method

Last updated: 2025-10-17

All entries: 77277

Number of unique PDB entries: 32023

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FMODB ID: 975L2

Calculation Name: 1C1G-A-Xray547

Preferred Name:

Target Type:

Ligand Name:

Ligand 3-letter code:

Ligand of Interest (LOI):

Structure Source: PDB

PDB ID: 1C1G

Chain ID: A

ChEMBL ID:

UniProt ID: P42639

Base Structure: X-ray

Registration Date: 2025-10-05

Reference: Sci Data 11, 1164 (2024).

DOI: https://doi.org/10.1038/s41597-024-03999-2

Apendix: None


IFIE MAP

IFIE Diagram


Modeling method
Optimization MOE:Amber10:EHT
Restraint OptAll
Protonation MOE:Protonate 3D
Complement MOE:Homology Modeling
Water No
Procedure Manual calculation
Remarks
ac.sh, 23 2024 Oct; Missing atoms/residues were imported from a 100% homology model, which was constructed by MOE.
FMO calculation
FMO method FMO2-MP2/6-31G(d)
Fragmentation Auto
Number of fragment 284
LigandResidueName
LigandFragmentNumber 0
LigandCharge
Software ABINIT-MP - Open Ver. 1 Rev. 23 (BINDS Ver. 1) / 20230922
Total energy (hartree)
FMO2-HF: Electronic energy -1750134.342827
FMO2-HF: Nuclear repulsion 1634868.577463
FMO2-HF: Total energy -115265.765364
FMO2-MP2: Total energy -115600.728348


3D Structure Molmil
Snapshot
 
Ligand structure

ligand structure
Ligand Interaction
ligand interaction
Ligand binding energy
IFIE [kcal/mol] PIEDA [kcal/mol] Charge transfer value [e]
IFIE SUMIFIE SUM at MP2 level. ESElectro static interaction energy. EXExchange-repulsion energy. CT+mixCharge transfer and mixing terms energy. DI(MP2)Dispersion energy. q(I=>J)Charge transfer value from I to J fragments.
N/AN/AN/AN/AN/AN/A


Interactive mode: IFIE and PIEDA for fragment #1(A:1:MET)


Summations of interaction energy for fragment #1(A:1:MET)
IFIE [kcal/mol] PIEDA [kcal/mol] Charge transfer value [e]
IFIE SUMIFIE SUM at MP2 level. ESElectro static interaction energy. EXExchange-repulsion energy. CT+mixCharge transfer and mixing terms energy. DI(MP2)Dispersion energy. q(I=>J)Charge transfer value from I to J fragments.
69.21572.0797.934-4.534-6.264-0.049
Interaction energy analysis for fragmet #1(A:1:MET)
Snapshot

IFIE Diagram

Base fragment(s) of PIEDA/IFIE
Single fragment Multi fragments
Fragment list
Charge [e] FCHARGE : 1 / q_Mulliken : 0.833 / q_NPA : 0.916
Distance from base fragment(s) [Å]
Dist
Interaction energy by IFIE and PIEDA
[kcal/mol]
| Total | > | ES | > | EX | >
| CT+mix | > | DI(MP2) | >
Fragment charge [e]
FCHARGE q_Mulliken
q_NPA q(I=>J)
Residue
Res #    RES   
Sort
Graph Options
X Axis Label
Y Axis Max Y Axis Min
Display   
frag_NumFragment number. ChainChain species. Res #Residue number. RES3-letter code of amino acid residue, ligand and solvent molecule. FCHARGEFormal charge [e]. q_MullikenFragment charge evaluated by Mulliken charge [e]. q_NPAFragment charge evaluated by natural population analysis(NPA) charge [e]. DISTDistance from Ligand [Å]. TotalIFIE at MP2 level [kcal/mol]. ESElectro static interaction energy by PIEDA [kcal/mol]. EXExchange-repulsion energy by PIEDA [kcal/mol]. CT+mixCharge transfer and mixing terms energy by PIEDA [kcal/mol]. DI(MP2)Dispersion energy by PIEDA [kcal/mol]. q(I=>J)Charge transfer value from I to J fragmens [e].
3A3ALA00.0320.0052.3653.9436.7240.733-1.281-2.233-0.010
4A4ILE0-0.025-0.0261.7262.7702.3377.195-3.058-3.705-0.037
5A5LYS10.9400.9673.62153.39553.9110.006-0.195-0.326-0.002
6A6LYS10.9730.9886.12432.10832.1080.0000.0000.0000.000
7A7LYS10.9680.9986.14736.06636.0660.0000.0000.0000.000
8A8MET00.022-0.0138.3212.4022.4020.0000.0000.0000.000
9A9GLN00.0300.0299.9271.6111.6110.0000.0000.0000.000
10A10MET00.0100.00811.3671.6651.6650.0000.0000.0000.000
11A11LEU00.011-0.00912.7141.0991.0990.0000.0000.0000.000
12A12LYS10.7660.87514.44617.47917.4790.0000.0000.0000.000
13A13LEU00.003-0.00215.5030.8010.8010.0000.0000.0000.000
14A14ASP-1-0.854-0.93317.309-14.751-14.7510.0000.0000.0000.000
15A15LYS10.8600.95418.24415.10815.1080.0000.0000.0000.000
16A16GLU-1-0.755-0.87119.927-15.410-15.4100.0000.0000.0000.000
17A17ASN00.0010.01321.8341.0111.0110.0000.0000.0000.000
18A18ALA0-0.025-0.02222.8220.5470.5470.0000.0000.0000.000
19A19LEU0-0.061-0.03323.4010.3430.3430.0000.0000.0000.000
20A20ASP-1-0.864-0.92625.771-11.638-11.6380.0000.0000.0000.000
21A21ARG10.8150.87527.62110.85610.8560.0000.0000.0000.000
22A22ALA0-0.036-0.00228.6150.2900.2900.0000.0000.0000.000
23A23ASP-1-0.908-0.96030.314-9.955-9.9550.0000.0000.0000.000
24A24GLU-1-0.828-0.89132.118-9.390-9.3900.0000.0000.0000.000
25A25ALA00.0210.00733.3680.3500.3500.0000.0000.0000.000
26A26GLU-1-0.980-0.99333.169-9.322-9.3220.0000.0000.0000.000
27A27ALA0-0.032-0.01536.2410.3190.3190.0000.0000.0000.000
28A28ASP-1-0.940-0.96337.969-7.681-7.6810.0000.0000.0000.000
29A29LYS10.8620.92238.7767.9277.9270.0000.0000.0000.000
30A30LYS10.8680.91640.3837.4817.4810.0000.0000.0000.000
31A31ALA00.0070.00142.2800.2230.2230.0000.0000.0000.000
32A32ALA00.0400.01543.6000.2270.2270.0000.0000.0000.000
33A33GLU-1-0.826-0.88643.785-6.874-6.8740.0000.0000.0000.000
34A34ASP-1-0.846-0.91246.231-6.746-6.7460.0000.0000.0000.000
35A35ARG10.8930.95148.1176.3696.3690.0000.0000.0000.000
36A36SER0-0.007-0.02848.1460.1380.1380.0000.0000.0000.000
37A37LYS10.7680.88047.4516.8346.8340.0000.0000.0000.000
38A38GLN00.0280.02352.660-0.031-0.0310.0000.0000.0000.000
39A39LEU0-0.032-0.01952.1900.1170.1170.0000.0000.0000.000
40A40GLU-1-0.907-0.93854.902-5.707-5.7070.0000.0000.0000.000
41A41ASP-1-0.964-0.98556.745-5.472-5.4720.0000.0000.0000.000
42A42GLU-1-0.853-0.93957.572-5.503-5.5030.0000.0000.0000.000
43A43LEU00.0100.00057.9310.1380.1380.0000.0000.0000.000
44A44VAL0-0.034-0.01060.9630.1460.1460.0000.0000.0000.000
45A45SER0-0.055-0.01862.9080.1490.1490.0000.0000.0000.000
46A46LEU00.0290.00062.3610.1150.1150.0000.0000.0000.000
47A47GLN00.0240.00762.2630.1090.1090.0000.0000.0000.000
48A48LYS10.8450.92965.3745.0155.0150.0000.0000.0000.000
49A49LYS10.9540.97268.9664.7104.7100.0000.0000.0000.000
50A50LEU00.0440.04368.5110.0580.0580.0000.0000.0000.000
51A51LYS10.9610.98069.5874.6554.6550.0000.0000.0000.000
52A52ALA0-0.0160.00273.3580.0580.0580.0000.0000.0000.000
53A53THR0-0.011-0.02973.6460.0500.0500.0000.0000.0000.000
54A54GLU-1-0.958-0.97173.788-4.372-4.3720.0000.0000.0000.000
55A55ASP-1-0.818-0.90476.855-3.970-3.9700.0000.0000.0000.000
56A56GLU-1-0.865-0.92679.316-3.981-3.9810.0000.0000.0000.000
57A57LEU0-0.050-0.01378.1830.0560.0560.0000.0000.0000.000
58A58ASP-1-0.928-0.95380.819-3.974-3.9740.0000.0000.0000.000
59A59LYS10.8060.89982.4913.9953.9950.0000.0000.0000.000
60A60TYR0-0.071-0.05882.5130.0890.0890.0000.0000.0000.000
61A61SER0-0.014-0.00484.7860.0690.0690.0000.0000.0000.000
62A62GLU-1-0.899-0.95886.103-3.732-3.7320.0000.0000.0000.000
63A63ALA00.0120.00188.9850.0530.0530.0000.0000.0000.000
64A64LEU0-0.034-0.01688.9850.0450.0450.0000.0000.0000.000
65A65LYS10.8290.92587.9553.7153.7150.0000.0000.0000.000
66A66ASP-1-0.732-0.86093.317-3.359-3.3590.0000.0000.0000.000
67A67ALA0-0.031-0.00294.7010.0520.0520.0000.0000.0000.000
68A68GLN0-0.018-0.01195.6430.0080.0080.0000.0000.0000.000
69A69GLU-1-0.916-0.97095.414-3.368-3.3680.0000.0000.0000.000
70A70LYS10.7460.84597.5153.3843.3840.0000.0000.0000.000
71A71LEU0-0.0130.00899.0910.0360.0360.0000.0000.0000.000
72A72GLU-1-0.780-0.886100.214-3.197-3.1970.0000.0000.0000.000
73A73LEU0-0.085-0.032103.3420.0400.0400.0000.0000.0000.000
74A74ALA0-0.024-0.023105.2470.0400.0400.0000.0000.0000.000
75A75GLU-1-0.909-0.966103.919-3.122-3.1220.0000.0000.0000.000
76A76LYS10.8350.910103.9783.1563.1560.0000.0000.0000.000
77A77LYS10.9390.964109.4133.0053.0050.0000.0000.0000.000
78A78ALA00.0030.032110.9290.0280.0280.0000.0000.0000.000
79A79THR00.023-0.005111.7080.0190.0190.0000.0000.0000.000
80A80ASP-1-1.004-0.983113.775-2.811-2.8110.0000.0000.0000.000
81A81ALA00.0580.021115.5530.0310.0310.0000.0000.0000.000
82A82GLU-1-0.946-0.983114.457-2.829-2.8290.0000.0000.0000.000
83A83ALA0-0.026-0.009118.2060.0280.0280.0000.0000.0000.000
84A84ASP-1-0.895-0.948120.043-2.659-2.6590.0000.0000.0000.000
85A85VAL0-0.025-0.011120.6820.0340.0340.0000.0000.0000.000
86A86ALA0-0.0050.006122.3790.0290.0290.0000.0000.0000.000
87A87SER0-0.049-0.028124.1460.0360.0360.0000.0000.0000.000
88A88LEU00.011-0.001124.7520.0320.0320.0000.0000.0000.000
89A89ASN0-0.041-0.028125.7490.0360.0360.0000.0000.0000.000
90A90ARG10.9570.980126.5242.6042.6040.0000.0000.0000.000
91A91ARG10.9090.968130.4992.4572.4570.0000.0000.0000.000
92A92ILE00.006-0.003130.6810.0210.0210.0000.0000.0000.000
93A93GLN00.0260.008131.3120.0010.0010.0000.0000.0000.000
94A94LEU0-0.0140.008135.0310.0160.0160.0000.0000.0000.000
95A95PHE0-0.002-0.021136.7940.0180.0180.0000.0000.0000.000
96A96GLU-1-0.971-0.963136.465-2.390-2.3900.0000.0000.0000.000
97A97GLU-1-0.893-0.952138.093-2.351-2.3510.0000.0000.0000.000
98A98GLU-1-1.000-1.012140.377-2.307-2.3070.0000.0000.0000.000
99A99LEU0-0.024-0.010141.1400.0240.0240.0000.0000.0000.000
100A100ASP-1-0.891-0.933142.595-2.275-2.2750.0000.0000.0000.000
101A101ARG10.9520.976145.4702.2532.2530.0000.0000.0000.000
102A102ALA0-0.041-0.023147.0890.0230.0230.0000.0000.0000.000
103A103GLN0-0.002-0.011146.5390.0140.0140.0000.0000.0000.000
104A104GLU-1-0.904-0.949148.917-2.187-2.1870.0000.0000.0000.000
105A105ARG10.8970.940151.6822.1502.1500.0000.0000.0000.000
106A106LEU00.0130.019152.1090.0180.0180.0000.0000.0000.000
107A107ALA00.0290.020154.0860.0160.0160.0000.0000.0000.000
108A108THR0-0.017-0.022155.7680.0180.0180.0000.0000.0000.000
109A109ALA0-0.066-0.023157.3040.0180.0180.0000.0000.0000.000
110A110LEU00.0470.007156.8340.0160.0160.0000.0000.0000.000
111A111GLN00.0030.013160.0000.0060.0060.0000.0000.0000.000
112A112LYS10.8610.912160.5832.0542.0540.0000.0000.0000.000
113A113LEU0-0.0360.006161.7250.0120.0120.0000.0000.0000.000
114A114GLU-1-0.779-0.877163.790-1.987-1.9870.0000.0000.0000.000
115A115GLU-1-0.907-0.937165.911-1.942-1.9420.0000.0000.0000.000
116A116ALA0-0.025-0.013167.8610.0150.0150.0000.0000.0000.000
117A117GLU-1-0.909-0.962166.145-1.971-1.9710.0000.0000.0000.000
118A118LYS10.7560.851167.1451.9761.9760.0000.0000.0000.000
119A119ALA00.0290.017172.2420.0140.0140.0000.0000.0000.000
120A120ALA0-0.0110.005173.0810.0150.0150.0000.0000.0000.000
121A121ASP-1-0.846-0.936173.554-1.879-1.8790.0000.0000.0000.000
122A122GLU-1-1.023-1.004175.974-1.837-1.8370.0000.0000.0000.000
123A123SER00.002-0.012177.9660.0180.0180.0000.0000.0000.000
124A124GLU-1-0.865-0.921177.690-1.815-1.8150.0000.0000.0000.000
125A125ARG10.8540.929175.6661.8711.8710.0000.0000.0000.000
126A126GLY0-0.0050.002182.1980.0130.0130.0000.0000.0000.000
127A127MET0-0.032-0.009181.9480.0130.0130.0000.0000.0000.000
128A128LYS10.9070.946181.4901.8221.8220.0000.0000.0000.000
129A129VAL0-0.051-0.012186.0100.0130.0130.0000.0000.0000.000
130A130ILE0-0.021-0.021187.7640.0140.0140.0000.0000.0000.000
131A131GLU-1-0.863-0.941185.468-1.765-1.7650.0000.0000.0000.000
132A132SER0-0.030-0.030189.4000.0110.0110.0000.0000.0000.000
133A133ARG10.8670.927191.9171.7021.7020.0000.0000.0000.000
134A134ALA00.0240.028193.2550.0110.0110.0000.0000.0000.000
135A135GLN00.0670.035192.2500.0100.0100.0000.0000.0000.000
136A136LYS10.9480.976196.1991.6591.6590.0000.0000.0000.000
137A137ASP-1-0.868-0.938198.133-1.637-1.6370.0000.0000.0000.000
138A138GLU-1-0.929-0.969196.326-1.668-1.6680.0000.0000.0000.000
139A139GLU-1-0.950-0.962200.358-1.627-1.6270.0000.0000.0000.000
140A140LYS10.7850.875201.8071.6401.6400.0000.0000.0000.000
141A141MET0-0.0070.000202.7630.0110.0110.0000.0000.0000.000
142A142GLU-1-0.925-0.955204.069-1.606-1.6060.0000.0000.0000.000
143A143ILE00.000-0.001206.0590.0110.0110.0000.0000.0000.000
144A144GLN00.003-0.008208.2180.0040.0040.0000.0000.0000.000
145A145GLU-1-0.853-0.907208.673-1.568-1.5680.0000.0000.0000.000
146A146ILE0-0.033-0.011209.8140.0090.0090.0000.0000.0000.000
147A147GLN00.0290.020211.8490.0030.0030.0000.0000.0000.000
148A148LEU0-0.029-0.015213.6330.0100.0100.0000.0000.0000.000
149A149LYS10.7810.865211.0771.5671.5670.0000.0000.0000.000
150A150GLU-1-0.931-0.955216.100-1.514-1.5140.0000.0000.0000.000
151A151ALA0-0.006-0.012217.9560.0090.0090.0000.0000.0000.000
152A152LYS10.8310.918219.3051.5001.5000.0000.0000.0000.000
153A153HIS0-0.037-0.048219.5670.0040.0040.0000.0000.0000.000
154A154ILE0-0.0090.001222.1330.0080.0080.0000.0000.0000.000
155A155ALA00.0270.016223.9740.0080.0080.0000.0000.0000.000
156A156GLU-1-0.806-0.887222.567-1.477-1.4770.0000.0000.0000.000
157A157ASP-1-0.916-0.955226.338-1.436-1.4360.0000.0000.0000.000
158A158ALA0-0.004-0.002228.1410.0080.0080.0000.0000.0000.000
159A159ASP-1-0.885-0.948229.639-1.426-1.4260.0000.0000.0000.000
160A160ARG10.9340.964226.1891.4551.4550.0000.0000.0000.000
161A161LYS10.8770.936230.1051.4381.4380.0000.0000.0000.000
162A162TYR0-0.0230.006233.9380.0080.0080.0000.0000.0000.000
163A163GLU-1-0.901-0.961234.463-1.396-1.3960.0000.0000.0000.000
164A164GLU-1-1.008-0.998236.084-1.390-1.3900.0000.0000.0000.000
165A165VAL0-0.061-0.041238.1400.0090.0090.0000.0000.0000.000
166A166ALA00.0340.018239.6790.0080.0080.0000.0000.0000.000
167A167ARG10.9480.982241.0091.3691.3690.0000.0000.0000.000
168A168LYS10.8920.925242.1951.3591.3590.0000.0000.0000.000
169A169LEU00.0010.023243.8280.0050.0050.0000.0000.0000.000
170A170VAL00.0570.025245.3010.0060.0060.0000.0000.0000.000
171A171ILE0-0.061-0.027247.2760.0060.0060.0000.0000.0000.000
172A172ILE0-0.060-0.038248.6550.0060.0060.0000.0000.0000.000
173A173GLU-1-0.906-0.945248.567-1.323-1.3230.0000.0000.0000.000
174A174SER00.028-0.007251.7590.0040.0040.0000.0000.0000.000
175A175ASP-1-0.917-0.949253.386-1.288-1.2880.0000.0000.0000.000
176A176LEU0-0.054-0.008254.8240.0050.0050.0000.0000.0000.000
177A177GLU-1-0.832-0.906255.113-1.288-1.2880.0000.0000.0000.000
178A178ARG10.8210.892255.6091.2921.2920.0000.0000.0000.000
179A179ALA0-0.068-0.039259.3360.0060.0060.0000.0000.0000.000
180A180GLU-1-0.910-0.955259.377-1.264-1.2640.0000.0000.0000.000
181A181GLU-1-0.891-0.939262.404-1.251-1.2510.0000.0000.0000.000
182A182ARG10.8510.913262.6251.2591.2590.0000.0000.0000.000
183A183ALA0-0.0070.027265.3210.0060.0060.0000.0000.0000.000
184A184GLU-1-0.849-0.932266.099-1.233-1.2330.0000.0000.0000.000
185A185LEU0-0.070-0.034268.7400.0070.0070.0000.0000.0000.000
186A186SER0-0.070-0.060269.3520.0070.0070.0000.0000.0000.000
187A187GLU-1-0.946-0.971268.767-1.222-1.2220.0000.0000.0000.000
188A188GLY0-0.016-0.007272.9450.0050.0050.0000.0000.0000.000
189A189LYS10.8930.943274.4411.2041.2040.0000.0000.0000.000
190A190CYS0-0.073-0.024274.9210.0040.0040.0000.0000.0000.000
191A191ALA00.0500.019276.9450.0050.0050.0000.0000.0000.000
192A192GLU-1-0.916-0.957278.663-1.179-1.1790.0000.0000.0000.000
193A193LEU00.0220.006277.8820.0050.0050.0000.0000.0000.000
194A194GLU-1-0.902-0.949278.903-1.179-1.1790.0000.0000.0000.000
195A195GLU-1-0.970-0.972282.755-1.148-1.1480.0000.0000.0000.000
196A196GLU-1-0.893-0.942283.955-1.155-1.1550.0000.0000.0000.000
197A197ILE0-0.024-0.008284.0190.0060.0060.0000.0000.0000.000
198A198LYS10.8990.957284.3571.1631.1630.0000.0000.0000.000
199A199THR0-0.011-0.011289.0840.0060.0060.0000.0000.0000.000
200A200VAL00.0020.003288.6670.0060.0060.0000.0000.0000.000
201A201THR0-0.036-0.042289.2760.0060.0060.0000.0000.0000.000
202A202ASN0-0.013-0.008292.1360.0040.0040.0000.0000.0000.000
203A203ASN00.0330.020294.7180.0080.0080.0000.0000.0000.000
204A204LEU0-0.0060.005293.7010.0040.0040.0000.0000.0000.000
205A205LYS10.9550.971293.5151.1261.1260.0000.0000.0000.000
206A206SER0-0.041-0.013298.8390.0050.0050.0000.0000.0000.000
207A207LEU0-0.017-0.019298.2590.0050.0050.0000.0000.0000.000
208A208GLU-1-0.940-0.957299.208-1.100-1.1000.0000.0000.0000.000
209A209ALA00.0510.020302.2630.0040.0040.0000.0000.0000.000
210A210GLN0-0.070-0.046303.4170.0030.0030.0000.0000.0000.000
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