
FMODB ID: LQMG9
Calculation Name: 4OWT-C-Xray540
Preferred Name:
Target Type:
Ligand Name:
ligand 3-letter code:
PDB ID: 4OWT
Chain ID: C
UniProt ID: Q68E01
Base Structure: X-ray
Registration Date: 2025-07-11
Reference: C. Watanabe, N. Tani, K. Kamisaka, T. Honma et al., Interaction energy analysis of Apo structure dataset on FMODB, To be published.
Apendix: None
Modeling method
Optimization | MOE:Amber10:EHT |
---|---|
Restraint | OptH |
Protonation | MOE:Protonate 3D |
Complement | MOE:Structure Preparation |
Water | No |
Procedure | Auto-FMO protocol ver. 2.20220422 |
FMO calculation
FMO method | FMO2-MP2/6-31G(d) |
---|---|
Fragmentation | Auto |
Number of fragment | 74 |
LigandResidueName | |
LigandFragmentNumber | 0 |
LigandCharge | |
Software | ABINIT-MP - Open Ver. 1 Rev. 23Q2 / 20200603(SMP) |
Total energy (hartree)
FMO2-HF: Electronic energy | -147846.834911 |
---|---|
FMO2-HF: Nuclear repulsion | 133467.451566 |
FMO2-HF: Total energy | -14379.383345 |
FMO2-MP2: Total energy | -14422.591694 |
3D Structure
Ligand structure

Ligand Interaction

Ligand binding energy
IFIE [kcal/mol] | PIEDA [kcal/mol] | Charge transfer value [e] | |||
---|---|---|---|---|---|
IFIE SUMIFIE SUM at MP2 level. | ESElectro static interaction energy. | EXExchange-repulsion energy. | CT+mixCharge transfer and mixing terms energy. | DI(MP2)Dispersion energy. | q(I=>J)Charge transfer value from I to J fragments. |
N/A | N/A | N/A | N/A | N/A | N/A |
Interactive mode: IFIE and PIEDA for fragment #1(C:63:HIS)
Summations of interaction energy for
fragment #1(C:63:HIS)
IFIE [kcal/mol] | PIEDA [kcal/mol] | Charge transfer value [e] | |||
---|---|---|---|---|---|
IFIE SUMIFIE SUM at MP2 level. | ESElectro static interaction energy. | EXExchange-repulsion energy. | CT+mixCharge transfer and mixing terms energy. | DI(MP2)Dispersion energy. | q(I=>J)Charge transfer value from I to J fragments. |
2.172 | -28.622 | 30.029 | 9.716 | -8.949 | 0.014 |
Interaction energy analysis for fragmet #1(C:63:HIS)
frag_NumFragment number. | ChainChain species. | Res #Residue number. | RES3-letter code of amino acid residue, ligand and solvent molecule. | FCHARGEFormal charge [e]. | q_MullikenFragment charge evaluated by Mulliken charge [e]. | q_NPAFragment charge evaluated by natural population analysis(NPA) charge [e]. | DISTDistance from Ligand [Å]. | TotalIFIE at MP2 level [kcal/mol]. | ESElectro static interaction energy by PIEDA [kcal/mol]. | EXExchange-repulsion energy by PIEDA [kcal/mol]. | CT+mixCharge transfer and mixing terms energy by PIEDA [kcal/mol]. | DI(MP2)Dispersion energy by PIEDA [kcal/mol]. | q(I=>J)Charge transfer value from I to J fragmens [e]. |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
4 | C | 64 | ILE | 0 | -0.028 | 0.147 | 3.417 | -1.532 | -0.301 | 0.062 | -0.716 | -0.577 | 0.003 |
5 | C | 65 | ALA | 0 | 0.137 | -0.116 | 2.651 | 16.315 | 2.661 | 0.392 | 14.594 | -1.331 | -0.006 |
6 | C | 65 | ALA | 0 | -0.036 | 0.135 | 5.202 | -0.593 | -0.593 | 0.000 | 0.000 | 0.000 | 0.000 |
7 | C | 66 | ALA | 0 | 0.100 | -0.127 | 2.468 | 5.860 | 0.086 | 0.726 | 5.998 | -0.950 | -0.001 |
8 | C | 66 | ALA | 0 | -0.088 | 0.118 | 1.741 | 0.770 | -3.053 | 9.084 | -4.271 | -0.989 | 0.002 |
9 | C | 67 | GLN | 0 | 0.044 | -0.126 | 2.094 | -8.600 | -13.580 | 9.294 | -1.874 | -2.440 | 0.017 |
10 | C | 67 | GLN | 0 | -0.065 | 0.090 | 1.703 | -0.993 | -5.033 | 10.403 | -3.902 | -2.462 | -0.004 |
11 | C | 68 | GLN | 0 | 0.087 | -0.102 | 3.676 | -3.834 | -3.588 | 0.068 | -0.113 | -0.200 | 0.003 |
12 | C | 68 | GLN | 0 | -0.075 | 0.109 | 6.114 | -1.002 | -1.002 | 0.000 | 0.000 | 0.000 | 0.000 |
13 | C | 69 | LYS | 0 | 0.122 | -0.058 | 6.149 | -1.239 | -1.239 | 0.000 | 0.000 | 0.000 | 0.000 |
14 | C | 69 | LYS | 1 | 0.841 | 1.060 | 6.342 | -1.229 | -1.229 | 0.000 | 0.000 | 0.000 | 0.000 |
15 | C | 70 | ALA | 0 | 0.086 | -0.111 | 6.576 | -0.807 | -0.807 | 0.000 | 0.000 | 0.000 | 0.000 |
16 | C | 70 | ALA | 0 | -0.072 | 0.111 | 6.607 | -0.069 | -0.069 | 0.000 | 0.000 | 0.000 | 0.000 |
17 | C | 71 | ALA | 0 | 0.087 | -0.110 | 7.821 | -0.680 | -0.680 | 0.000 | 0.000 | 0.000 | 0.000 |
18 | C | 71 | ALA | 0 | -0.073 | 0.116 | 8.729 | 0.064 | 0.064 | 0.000 | 0.000 | 0.000 | 0.000 |
19 | C | 72 | LEU | 0 | 0.130 | -0.114 | 9.809 | -0.402 | -0.402 | 0.000 | 0.000 | 0.000 | 0.000 |
20 | C | 72 | LEU | 0 | -0.112 | 0.111 | 11.466 | 0.042 | 0.042 | 0.000 | 0.000 | 0.000 | 0.000 |
21 | C | 73 | GLN | 0 | 0.079 | -0.088 | 11.265 | -0.243 | -0.243 | 0.000 | 0.000 | 0.000 | 0.000 |
22 | C | 73 | GLN | 0 | -0.137 | 0.069 | 11.599 | -0.024 | -0.024 | 0.000 | 0.000 | 0.000 | 0.000 |
23 | C | 74 | HIS | 0 | 0.088 | -0.083 | 12.273 | -0.203 | -0.203 | 0.000 | 0.000 | 0.000 | 0.000 |
24 | C | 74 | HIS | 0 | -0.087 | 0.081 | 12.452 | 0.007 | 0.007 | 0.000 | 0.000 | 0.000 | 0.000 |
25 | C | 75 | ALA | 0 | 0.070 | -0.114 | 14.071 | -0.154 | -0.154 | 0.000 | 0.000 | 0.000 | 0.000 |
26 | C | 75 | ALA | 0 | -0.071 | 0.105 | 15.126 | 0.021 | 0.021 | 0.000 | 0.000 | 0.000 | 0.000 |
27 | C | 76 | HIS | 0 | 0.056 | -0.089 | 15.837 | -0.093 | -0.093 | 0.000 | 0.000 | 0.000 | 0.000 |
28 | C | 76 | HIS | 0 | -0.119 | 0.067 | 16.169 | -0.008 | -0.008 | 0.000 | 0.000 | 0.000 | 0.000 |
29 | C | 77 | ALA | 0 | 0.122 | -0.072 | 16.949 | -0.068 | -0.068 | 0.000 | 0.000 | 0.000 | 0.000 |
30 | C | 77 | ALA | 0 | -0.100 | 0.079 | 17.253 | -0.004 | -0.004 | 0.000 | 0.000 | 0.000 | 0.000 |
31 | C | 78 | HIS | 0 | -0.021 | -0.103 | 18.616 | -0.065 | -0.065 | 0.000 | 0.000 | 0.000 | 0.000 |
32 | C | 78 | HIS | 0 | -0.108 | 0.078 | 17.143 | -0.025 | -0.025 | 0.000 | 0.000 | 0.000 | 0.000 |
33 | C | 79 | SER | 0 | 0.114 | -0.046 | 20.076 | -0.050 | -0.050 | 0.000 | 0.000 | 0.000 | 0.000 |
34 | C | 79 | SER | 0 | -0.062 | 0.057 | 19.620 | -0.007 | -0.007 | 0.000 | 0.000 | 0.000 | 0.000 |
35 | C | 80 | SER | 0 | 0.070 | -0.062 | 21.427 | 0.030 | 0.030 | 0.000 | 0.000 | 0.000 | 0.000 |
36 | C | 80 | SER | 0 | -0.061 | 0.065 | 25.386 | -0.001 | -0.001 | 0.000 | 0.000 | 0.000 | 0.000 |
37 | C | 81 | GLY | 0 | -0.048 | -0.105 | 22.266 | -0.022 | -0.022 | 0.000 | 0.000 | 0.000 | 0.000 |
38 | C | 82 | TYR | 0 | 0.180 | 0.010 | 20.995 | 0.039 | 0.039 | 0.000 | 0.000 | 0.000 | 0.000 |
39 | C | 82 | TYR | 0 | -0.109 | 0.109 | 20.595 | 0.003 | 0.003 | 0.000 | 0.000 | 0.000 | 0.000 |
40 | C | 83 | PHE | 0 | 0.036 | -0.112 | 16.903 | -0.043 | -0.043 | 0.000 | 0.000 | 0.000 | 0.000 |
41 | C | 83 | PHE | 0 | -0.057 | 0.095 | 15.999 | 0.022 | 0.022 | 0.000 | 0.000 | 0.000 | 0.000 |
42 | C | 84 | ILE | 0 | 0.042 | -0.094 | 15.521 | -0.019 | -0.019 | 0.000 | 0.000 | 0.000 | 0.000 |
43 | C | 84 | ILE | 0 | -0.100 | 0.085 | 15.599 | -0.030 | -0.030 | 0.000 | 0.000 | 0.000 | 0.000 |
44 | C | 85 | THR | 0 | 0.050 | -0.079 | 10.942 | -0.073 | -0.073 | 0.000 | 0.000 | 0.000 | 0.000 |
45 | C | 85 | THR | 0 | -0.002 | 0.085 | 10.034 | -0.062 | -0.062 | 0.000 | 0.000 | 0.000 | 0.000 |
46 | C | 86 | GLN | 0 | 0.030 | -0.125 | 10.923 | -0.287 | -0.287 | 0.000 | 0.000 | 0.000 | 0.000 |
47 | C | 86 | GLN | 0 | -0.096 | 0.094 | 12.359 | -0.149 | -0.149 | 0.000 | 0.000 | 0.000 | 0.000 |
48 | C | 87 | ASP | 0 | 0.050 | -0.102 | 8.151 | 0.780 | 0.780 | 0.000 | 0.000 | 0.000 | 0.000 |
49 | C | 87 | ASP | -1 | -0.975 | -0.845 | 8.252 | 1.626 | 1.626 | 0.000 | 0.000 | 0.000 | 0.000 |
50 | C | 88 | SER | 0 | 0.092 | -0.088 | 9.058 | -0.286 | -0.286 | 0.000 | 0.000 | 0.000 | 0.000 |
51 | C | 88 | SER | 0 | -0.052 | 0.083 | 10.497 | -0.078 | -0.078 | 0.000 | 0.000 | 0.000 | 0.000 |
52 | C | 89 | ALA | 0 | 0.057 | -0.110 | 8.234 | 0.732 | 0.732 | 0.000 | 0.000 | 0.000 | 0.000 |
53 | C | 89 | ALA | 0 | -0.053 | 0.125 | 9.128 | -0.071 | -0.071 | 0.000 | 0.000 | 0.000 | 0.000 |
54 | C | 90 | PHE | 0 | -0.047 | -0.138 | 9.356 | -0.166 | -0.166 | 0.000 | 0.000 | 0.000 | 0.000 |
55 | C | 90 | PHE | 0 | -0.098 | 0.101 | 13.548 | -0.013 | -0.013 | 0.000 | 0.000 | 0.000 | 0.000 |
56 | C | 91 | GLY | 0 | 0.088 | -0.095 | 10.700 | -0.155 | -0.155 | 0.000 | 0.000 | 0.000 | 0.000 |
57 | C | 92 | ASN | 0 | 0.055 | 0.026 | 11.846 | -0.064 | -0.064 | 0.000 | 0.000 | 0.000 | 0.000 |
58 | C | 92 | ASN | 0 | -0.105 | 0.074 | 13.586 | -0.078 | -0.078 | 0.000 | 0.000 | 0.000 | 0.000 |
59 | C | 93 | LEU | 0 | 0.131 | -0.098 | 9.137 | -0.149 | -0.149 | 0.000 | 0.000 | 0.000 | 0.000 |
60 | C | 93 | LEU | 0 | -0.083 | 0.100 | 6.544 | 0.109 | 0.109 | 0.000 | 0.000 | 0.000 | 0.000 |
61 | C | 94 | ILE | 0 | 0.059 | -0.100 | 10.225 | 0.240 | 0.240 | 0.000 | 0.000 | 0.000 | 0.000 |
62 | C | 94 | ILE | 0 | -0.058 | 0.100 | 11.545 | -0.005 | -0.005 | 0.000 | 0.000 | 0.000 | 0.000 |
63 | C | 95 | LEU | 0 | 0.046 | -0.175 | 13.203 | -0.078 | -0.078 | 0.000 | 0.000 | 0.000 | 0.000 |
64 | C | 95 | LEU | 0 | -0.053 | 0.154 | 15.637 | -0.012 | -0.012 | 0.000 | 0.000 | 0.000 | 0.000 |
65 | C | 96 | PRO | 0 | 0.034 | -0.058 | 16.774 | 0.010 | 0.010 | 0.000 | 0.000 | 0.000 | 0.000 |
66 | C | 97 | VAL | 0 | 0.019 | 0.000 | 19.929 | -0.037 | -0.037 | 0.000 | 0.000 | 0.000 | 0.000 |
67 | C | 97 | VAL | 0 | -0.095 | 0.071 | 19.381 | -0.002 | -0.002 | 0.000 | 0.000 | 0.000 | 0.000 |
68 | C | 98 | LEU | 0 | 0.089 | -0.115 | 21.916 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
69 | C | 98 | LEU | 0 | -0.046 | 0.133 | 25.922 | -0.004 | -0.004 | 0.000 | 0.000 | 0.000 | 0.000 |
70 | C | 99 | PRO | 0 | 0.014 | -0.116 | 23.709 | 0.033 | 0.033 | 0.000 | 0.000 | 0.000 | 0.000 |
71 | C | 100 | ARG | 0 | 0.098 | 0.011 | 23.350 | -0.037 | -0.037 | 0.000 | 0.000 | 0.000 | 0.000 |
72 | C | 100 | ARG | 1 | 0.861 | 1.074 | 18.850 | -0.701 | -0.701 | 0.000 | 0.000 | 0.000 | 0.000 |
73 | C | 101 | LEU | 0 | -0.084 | -0.133 | 24.584 | 0.021 | 0.021 | 0.000 | 0.000 | 0.000 | 0.000 |
74 | C | 101 | LEU | 0 | 0.075 | 0.053 | 27.328 | -0.006 | -0.006 | 0.000 | 0.000 | 0.000 | 0.000 |