FMODB ID: PL649
Calculation Name: 1L2Y-A-MD50-69700ps
Preferred Name:
Target Type:
Ligand Name:
ligand 3-letter code:
PDB ID: 2OTU
Chain ID: A
UniProt ID: A2NN81
Base Structure: MD
Registration Date: 2019-08-09
Reference:
Modeling method
Optimization | BaseStructure_original |
---|---|
Restraint | BaseStructure_original |
Protonation | BaseStructure_original |
Complement | No |
Water | No |
Procedure | Manual calculation |
FMO calculation
FMO method | FMO2-MP2/6-31G(d) |
---|---|
Fragmentation | Auto |
Number of fragment | 10 |
LigandResidueName | |
LigandFragmentNumber | 0 |
LigandCharge | |
Software | MIZUHO/ABINIT-MP 3.0 |
Total energy (hartree)
FMO2-HF: Electronic energy | -22629.363599 |
---|---|
FMO2-HF: Nuclear repulsion | 18027.194456 |
FMO2-HF: Total energy | -4602.169143 |
FMO2-MP2: Total energy | -4615.580416 |
3D Structure
Ligand structure
Ligand Interaction
Ligand binding energy
"IFIE [kcal/mol] | PIEDA [kcal/mol] | Charge transfer value [e] | |||
---|---|---|---|---|---|
IFIE SUMIFIE SUM at MP2 level. | ESElectro static interaction energy. | EXExchange-repulsion energy. | CT+mixCharge transfer and mixing terms energy. | DI(MP2)Dispersion energy. | q(I=>J)Charge transfer value from I to J fragments. |
N/A | N/A | N/A | N/A | N/A | N/A |
Interactive mode: IFIE and PIEDA for fragment #1(:1:GLN )
Summations of interaction energy for
fragment #1(:1:GLN )
IFIE [kcal/mol] | PIEDA [kcal/mol] | Charge transfer value [e] | |||
---|---|---|---|---|---|
IFIE SUMIFIE SUM at MP2 level. | ESElectro static interaction energy. | EXExchange-repulsion energy. | CT+mixCharge transfer and mixing terms energy. | DI(MP2)Dispersion energy. | q(I=>J)Charge transfer value from I to J fragments. |
-54.931 | -47.075 | 17.041 | -8.73 | -16.168 | -0.046 |
Interaction energy analysis for fragmet #1(:1:GLN )
frag_NumFragment number. | ChainChain species. | Res #Residue number. | RES3-letter code of amino acid residue, ligand and solvent molecule. | FCHARGEFormal charge [e]. | q_MullikenFragment charge evaluated by Mulliken charge [e]. | q_NPAFragment charge evaluated by natural population analysis(NPA) charge [e]. | DISTDistance from Ligand [Å]. | TotalIFIE at MP2 level [kcal/mol]. | ESElectro static interaction energy by PIEDA [kcal/mol]. | EXExchange-repulsion energy by PIEDA [kcal/mol]. | CT+mixCharge transfer and mixing terms energy by PIEDA [kcal/mol]. | DI(MP2)Dispersion energy by PIEDA [kcal/mol]. | q(I=>J)Charge transfer value from I to J fragmens [e]. |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
3 | 3 | GLN | 0 | 0.017 | 0.018 | 2.162 | -14.147 | -9.180 | 9.046 | -5.590 | -8.422 | -0.011 | |
4 | 4 | GLN | 0 | 0.056 | 0.034 | 2.090 | -8.013 | -10.250 | 5.168 | -0.512 | -2.420 | -0.020 | |
5 | 5 | GLN | 0 | -0.038 | -0.015 | 2.674 | 6.894 | 7.980 | 0.264 | -0.439 | -0.912 | -0.002 | |
6 | 6 | GLN | 0 | 0.010 | -0.001 | 3.514 | -5.098 | -4.567 | 0.005 | -0.274 | -0.262 | -0.002 | |
7 | 7 | GLN | 0 | -0.011 | -0.007 | 2.766 | -13.292 | -9.804 | 2.559 | -1.913 | -4.134 | -0.011 | |
8 | 8 | GLN | 0 | -0.022 | -0.012 | 5.260 | 4.473 | 4.494 | -0.001 | -0.002 | -0.018 | 0.000 | |
9 | 9 | GLN | 0 | -0.045 | -0.032 | 8.072 | -1.572 | -1.572 | 0.000 | 0.000 | 0.000 | 0.000 | |
10 | 10 | GLN | -1 | -0.897 | -0.927 | 7.142 | -24.176 | -24.176 | 0.000 | 0.000 | 0.000 | 0.000 |