FMODB

FMODB: The database of quantum mechanical data based on the FMO method

Last updated: 2025-10-06

All entries: 70436

Number of unique PDB entries: 28101

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FMODB ID: QKM2Y

Calculation Name: 1TQ1-A-Other547

Preferred Name:

Target Type:

Ligand Name:

Ligand 3-letter code:

Ligand of Interest (LOI):

PDB ID: 1TQ1

Chain ID: A

ChEMBL ID:

UniProt ID: Q39129

Base Structure: SolutionNMR

Registration Date: 2025-09-02

Reference: Sci Data 11, 1164 (2024).

DOI: https://doi.org/10.1038/s41597-024-03999-2

Apendix: None


IFIE MAP

IFIE Diagram


Modeling method
Optimization MOE:Amber10:EHT
Restraint OptAll
Protonation MOE:Protonate 3D
Complement MOE:Homology Modeling
Water No
Procedure Manual calculation
FMO calculation
FMO method FMO2-MP2/6-31G(d)
Fragmentation Auto
Number of fragment 119
LigandResidueName
LigandFragmentNumber 0
LigandCharge
Software ABINIT-MP - Open Ver. 1 Rev. 23 (BINDS Ver. 1) / 20230922
Total energy (hartree)
FMO2-HF: Electronic energy -859064.691647
FMO2-HF: Nuclear repulsion 814654.517701
FMO2-HF: Total energy -44410.173947
FMO2-MP2: Total energy -44538.660239


3D Structure
Snapshot
 
Ligand structure

ligand structure
Ligand Interaction
ligand interaction
Ligand binding energy
IFIE [kcal/mol] PIEDA [kcal/mol] Charge transfer value [e]
IFIE SUMIFIE SUM at MP2 level. ESElectro static interaction energy. EXExchange-repulsion energy. CT+mixCharge transfer and mixing terms energy. DI(MP2)Dispersion energy. q(I=>J)Charge transfer value from I to J fragments.
N/AN/AN/AN/AN/AN/A


Interactive mode: IFIE and PIEDA for fragment #1(A:11:ALA)


Summations of interaction energy for fragment #1(A:11:ALA)
IFIE [kcal/mol] PIEDA [kcal/mol] Charge transfer value [e]
IFIE SUMIFIE SUM at MP2 level. ESElectro static interaction energy. EXExchange-repulsion energy. CT+mixCharge transfer and mixing terms energy. DI(MP2)Dispersion energy. q(I=>J)Charge transfer value from I to J fragments.
-51.104-49.428-0.024-0.587-1.065-0.002
Interaction energy analysis for fragmet #1(A:11:ALA)
Snapshot

IFIE Diagram

Base fragment(s) of PIEDA/IFIE
Single fragment Multi fragments
Fragment list
Charge [e] FCHARGE : 1 / q_Mulliken : 0.758 / q_NPA : 0.857
Distance from base fragment(s) [Å]
Dist
Interaction energy by IFIE and PIEDA
[kcal/mol]
| Total | > | ES | > | EX | >
| CT+mix | > | DI(MP2) | >
Fragment charge [e]
FCHARGE q_Mulliken
q_NPA q(I=>J)
Residue
Res #    RES   
Sort
Graph Options
X Axis Label
Y Axis Max Y Axis Min
Display   
frag_NumFragment number. ChainChain species. Res #Residue number. RES3-letter code of amino acid residue, ligand and solvent molecule. FCHARGEFormal charge [e]. q_MullikenFragment charge evaluated by Mulliken charge [e]. q_NPAFragment charge evaluated by natural population analysis(NPA) charge [e]. DISTDistance from Ligand [Å]. TotalIFIE at MP2 level [kcal/mol]. ESElectro static interaction energy by PIEDA [kcal/mol]. EXExchange-repulsion energy by PIEDA [kcal/mol]. CT+mixCharge transfer and mixing terms energy by PIEDA [kcal/mol]. DI(MP2)Dispersion energy by PIEDA [kcal/mol]. q(I=>J)Charge transfer value from I to J fragmens [e].
3A13GLU-1-0.896-0.9513.788-35.603-33.927-0.024-0.587-1.065-0.002
4A14SER0-0.024-0.0146.8154.5774.5770.0000.0000.0000.000
5A15ARG10.8650.9408.86130.40730.4070.0000.0000.0000.000
6A16VAL00.0460.0229.120-0.474-0.4740.0000.0000.0000.000
7A17PRO00.0000.02711.5961.1091.1090.0000.0000.0000.000
8A18SER0-0.009-0.02515.310-0.285-0.2850.0000.0000.0000.000
9A19SER00.0130.01317.3450.3610.3610.0000.0000.0000.000
10A20VAL0-0.001-0.00119.927-0.013-0.0130.0000.0000.0000.000
11A21SER0-0.002-0.00822.8210.2370.2370.0000.0000.0000.000
12A22VAL00.0410.01125.610-0.246-0.2460.0000.0000.0000.000
13A23THR0-0.021-0.00927.508-0.156-0.1560.0000.0000.0000.000
14A24VAL00.0320.01922.2410.1030.1030.0000.0000.0000.000
15A25ALA00.0120.00122.915-0.329-0.3290.0000.0000.0000.000
16A26HIS00.0080.00723.986-0.228-0.2280.0000.0000.0000.000
17A27ASP-1-0.912-0.95123.384-12.509-12.5090.0000.0000.0000.000
18A28LEU0-0.020-0.02118.220-0.328-0.3280.0000.0000.0000.000
19A29LEU0-0.0030.00222.144-0.311-0.3110.0000.0000.0000.000
20A30LEU0-0.028-0.01525.1090.2450.2450.0000.0000.0000.000
21A31ALA0-0.071-0.02321.1980.1050.1050.0000.0000.0000.000
22A32GLY0-0.0120.00422.597-0.318-0.3180.0000.0000.0000.000
23A33HIS0-0.051-0.01818.088-0.508-0.5080.0000.0000.0000.000
24A34ARG10.9090.95618.34617.02517.0250.0000.0000.0000.000
25A35TYR00.0570.02021.799-0.352-0.3520.0000.0000.0000.000
26A36LEU0-0.0120.00223.6000.4220.4220.0000.0000.0000.000
27A37ASP-1-0.794-0.89025.477-10.686-10.6860.0000.0000.0000.000
28A38VAL0-0.004-0.00326.8010.0910.0910.0000.0000.0000.000
29A39ARG10.9531.00629.8038.8878.8870.0000.0000.0000.000
30A40THR0-0.023-0.03733.3150.3200.3200.0000.0000.0000.000
31A41PRO0-0.006-0.01334.335-0.035-0.0350.0000.0000.0000.000
32A42GLU-1-0.921-0.96235.724-7.843-7.8430.0000.0000.0000.000
33A43GLU-1-0.825-0.91933.183-9.644-9.6440.0000.0000.0000.000
34A44PHE00.0490.01532.2230.0270.0270.0000.0000.0000.000
35A45SER0-0.056-0.02835.6520.0680.0680.0000.0000.0000.000
36A46GLN0-0.067-0.02838.5190.3280.3280.0000.0000.0000.000
37A47GLY0-0.0180.00636.5700.1170.1170.0000.0000.0000.000
38A48HIS0-0.025-0.02531.120-0.291-0.2910.0000.0000.0000.000
39A49ALA00.000-0.01232.9690.3550.3550.0000.0000.0000.000
40A50CYS-1-0.804-0.81832.855-9.505-9.5050.0000.0000.0000.000
41A51GLY00.0140.02029.757-0.058-0.0580.0000.0000.0000.000
42A52ALA0-0.049-0.02528.661-0.353-0.3530.0000.0000.0000.000
43A53ILE0-0.026-0.00326.7300.3180.3180.0000.0000.0000.000
44A54ASN0-0.028-0.02528.057-0.561-0.5610.0000.0000.0000.000
45A55VAL00.012-0.00327.1550.2860.2860.0000.0000.0000.000
46A56PRO0-0.0220.00629.173-0.198-0.1980.0000.0000.0000.000
47A57TYR00.0250.01325.1990.0140.0140.0000.0000.0000.000
48A58MET0-0.055-0.02022.619-0.484-0.4840.0000.0000.0000.000
49A59ASN0-0.037-0.02127.2100.5200.5200.0000.0000.0000.000
50A60ARG10.9260.96128.7959.2449.2440.0000.0000.0000.000
51A61GLY00.0710.02330.1640.3750.3750.0000.0000.0000.000
52A62ALA0-0.013-0.01830.293-0.175-0.1750.0000.0000.0000.000
53A63SER0-0.0070.00224.736-0.236-0.2360.0000.0000.0000.000
54A64GLY00.0250.01725.218-0.479-0.4790.0000.0000.0000.000
55A65MET0-0.076-0.02826.8490.3250.3250.0000.0000.0000.000
56A66SER00.0950.05223.717-0.261-0.2610.0000.0000.0000.000
57A67LYS10.9270.96126.78710.14010.1400.0000.0000.0000.000
58A68ASN00.012-0.00326.456-0.530-0.5300.0000.0000.0000.000
59A69THR0-0.056-0.03327.8510.5150.5150.0000.0000.0000.000
60A70ASP-1-0.803-0.88327.382-11.059-11.0590.0000.0000.0000.000
61A71PHE00.032-0.01124.476-0.419-0.4190.0000.0000.0000.000
62A72LEU0-0.024-0.00622.122-0.665-0.6650.0000.0000.0000.000
63A73GLU-1-0.899-0.94820.665-13.491-13.4910.0000.0000.0000.000
64A74GLN0-0.013-0.01319.761-0.880-0.8800.0000.0000.0000.000
65A75VAL0-0.051-0.00218.506-0.793-0.7930.0000.0000.0000.000
66A76SER00.0370.01116.700-1.632-1.6320.0000.0000.0000.000
67A77SER0-0.070-0.04115.315-1.701-1.7010.0000.0000.0000.000
68A78HIS0-0.048-0.04910.553-2.948-2.9480.0000.0000.0000.000
69A79PHE0-0.0390.00312.088-1.723-1.7230.0000.0000.0000.000
70A80GLY00.0720.03414.6690.5630.5630.0000.0000.0000.000
71A81GLN00.023-0.01916.7560.6120.6120.0000.0000.0000.000
72A82SER0-0.012-0.02618.7780.9120.9120.0000.0000.0000.000
73A83ASP-1-0.882-0.93414.164-20.493-20.4930.0000.0000.0000.000
74A84ASN0-0.020-0.00913.186-0.592-0.5920.0000.0000.0000.000
75A85ILE0-0.093-0.02515.0061.0321.0320.0000.0000.0000.000
76A86ILE0-0.021-0.00718.207-0.602-0.6020.0000.0000.0000.000
77A87VAL00.0360.00620.5110.5950.5950.0000.0000.0000.000
78A88GLY0-0.0070.01022.853-0.201-0.2010.0000.0000.0000.000
79A89CYS-1-0.733-0.74325.899-10.483-10.4830.0000.0000.0000.000
80A90GLN00.006-0.00628.6580.2570.2570.0000.0000.0000.000
81A91SER0-0.095-0.08331.4410.4360.4360.0000.0000.0000.000
82A92GLY00.0660.01529.577-0.373-0.3730.0000.0000.0000.000
83A93GLY0-0.012-0.00429.0100.3560.3560.0000.0000.0000.000
84A94ARG10.8840.91429.3938.4938.4930.0000.0000.0000.000
85A95SER00.046-0.05528.853-0.017-0.0170.0000.0000.0000.000
86A96ILE00.0110.02924.395-0.135-0.1350.0000.0000.0000.000
87A97LYS10.9370.98424.6749.4949.4940.0000.0000.0000.000
88A98ALA00.0340.02726.185-0.160-0.1600.0000.0000.0000.000
89A99THR00.015-0.02122.6350.1000.1000.0000.0000.0000.000
90A100THR0-0.035-0.03021.475-0.764-0.7640.0000.0000.0000.000
91A101ASP-1-0.923-0.96922.473-11.913-11.9130.0000.0000.0000.000
92A102LEU0-0.049-0.02523.084-0.174-0.1740.0000.0000.0000.000
93A103LEU0-0.043-0.01915.994-0.666-0.6660.0000.0000.0000.000
94A104HIS0-0.015-0.00818.669-1.323-1.3230.0000.0000.0000.000
95A105ALA0-0.0230.00020.544-0.085-0.0850.0000.0000.0000.000
96A106GLY0-0.0220.00817.245-0.349-0.3490.0000.0000.0000.000
97A107PHE0-0.051-0.02318.1170.1700.1700.0000.0000.0000.000
98A108THR00.016-0.01113.077-0.407-0.4070.0000.0000.0000.000
99A109GLY00.0170.02212.424-0.334-0.3340.0000.0000.0000.000
100A110VAL0-0.036-0.00513.3740.4110.4110.0000.0000.0000.000
101A111LYS10.9050.96014.45819.52319.5230.0000.0000.0000.000
102A112ASP-1-0.771-0.86818.305-14.266-14.2660.0000.0000.0000.000
103A113ILE0-0.068-0.05521.2860.2330.2330.0000.0000.0000.000
104A114VAL0-0.035-0.01124.4920.3770.3770.0000.0000.0000.000
105A115GLY0-0.025-0.02027.9720.2030.2030.0000.0000.0000.000
106A116GLY00.0910.03628.888-0.373-0.3730.0000.0000.0000.000
107A117TYR0-0.020-0.01130.5570.4010.4010.0000.0000.0000.000
108A118SER0-0.057-0.02633.8790.3370.3370.0000.0000.0000.000
109A119ALA0-0.006-0.00932.5080.2520.2520.0000.0000.0000.000
110A120TRP00.016-0.00431.4230.1550.1550.0000.0000.0000.000
111A121ALA00.0110.00034.7730.2040.2040.0000.0000.0000.000
112A122LYS10.8490.93336.7858.6448.6440.0000.0000.0000.000
113A123ASN0-0.050-0.02634.6260.2860.2860.0000.0000.0000.000
114A124GLY00.0230.02438.7870.1860.1860.0000.0000.0000.000
115A125LEU0-0.018-0.00837.3160.1600.1600.0000.0000.0000.000
116A126PRO0-0.036-0.00836.654-0.295-0.2950.0000.0000.0000.000
117A127THR0-0.041-0.11735.2210.3110.3110.0000.0000.0000.000
118A128LYS10.8030.91035.6057.7327.7320.0000.0000.0000.000
119A129ALA-1-0.865-0.91637.574-7.745-7.7450.0000.0000.0000.000